Protein–RNA interactions for Protein: Q9D7S9

Chmp5, Charged multivesicular body protein 5, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp5Q9D7S9 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Chmp5Q9D7S9 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Chmp5Q9D7S9 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Chmp5Q9D7S9 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC17.72■□□□□ 0.43
Chmp5Q9D7S9 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Chmp5Q9D7S9 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC17.72■□□□□ 0.43
Chmp5Q9D7S9 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Chmp5Q9D7S9 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Chmp5Q9D7S9 Gm18244-201ENSMUST00000219747 1566 ntBASIC17.71■□□□□ 0.43
Chmp5Q9D7S9 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Chmp5Q9D7S9 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Chmp5Q9D7S9 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Chmp5Q9D7S9 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC17.71■□□□□ 0.43
Chmp5Q9D7S9 Klk2-ps-201ENSMUST00000205342 571 ntBASIC17.71■□□□□ 0.43
Chmp5Q9D7S9 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Chmp5Q9D7S9 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Chmp5Q9D7S9 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Chmp5Q9D7S9 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Chmp5Q9D7S9 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Chmp5Q9D7S9 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Chmp5Q9D7S9 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Chmp5Q9D7S9 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC17.71■□□□□ 0.43
Chmp5Q9D7S9 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Chmp5Q9D7S9 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Chmp5Q9D7S9 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Chmp5Q9D7S9 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Chmp5Q9D7S9 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Chmp5Q9D7S9 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Chmp5Q9D7S9 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Chmp5Q9D7S9 Gm38346-201ENSMUST00000192379 2639 ntBASIC17.7■□□□□ 0.42
Chmp5Q9D7S9 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Chmp5Q9D7S9 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Chmp5Q9D7S9 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Chmp5Q9D7S9 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Chmp5Q9D7S9 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Chmp5Q9D7S9 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Chmp5Q9D7S9 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Chmp5Q9D7S9 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Chmp5Q9D7S9 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Chmp5Q9D7S9 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Chmp5Q9D7S9 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Chmp5Q9D7S9 AC126549.2-201ENSMUST00000223997 1976 ntBASIC17.7■□□□□ 0.42
Chmp5Q9D7S9 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC17.7■□□□□ 0.42
Chmp5Q9D7S9 Gm28659-201ENSMUST00000188013 759 ntBASIC17.7■□□□□ 0.42
Chmp5Q9D7S9 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Chmp5Q9D7S9 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
Chmp5Q9D7S9 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Chmp5Q9D7S9 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Chmp5Q9D7S9 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Chmp5Q9D7S9 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Chmp5Q9D7S9 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Chmp5Q9D7S9 Gm13410-201ENSMUST00000117058 1415 ntBASIC17.7■□□□□ 0.42
Chmp5Q9D7S9 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Chmp5Q9D7S9 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Chmp5Q9D7S9 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Chmp5Q9D7S9 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Chmp5Q9D7S9 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Chmp5Q9D7S9 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Chmp5Q9D7S9 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Chmp5Q9D7S9 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
Chmp5Q9D7S9 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Chmp5Q9D7S9 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Chmp5Q9D7S9 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC17.69■□□□□ 0.42
Chmp5Q9D7S9 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Chmp5Q9D7S9 AC122901.1-201ENSMUST00000214203 1790 ntBASIC17.69■□□□□ 0.42
Chmp5Q9D7S9 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Chmp5Q9D7S9 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Chmp5Q9D7S9 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Chmp5Q9D7S9 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Chmp5Q9D7S9 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Chmp5Q9D7S9 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Chmp5Q9D7S9 Gm12350-201ENSMUST00000121208 462 ntBASIC17.69■□□□□ 0.42
Chmp5Q9D7S9 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Chmp5Q9D7S9 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC17.69■□□□□ 0.42
Chmp5Q9D7S9 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC17.69■□□□□ 0.42
Chmp5Q9D7S9 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Chmp5Q9D7S9 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Chmp5Q9D7S9 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Chmp5Q9D7S9 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Chmp5Q9D7S9 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
Chmp5Q9D7S9 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC17.69■□□□□ 0.42
Chmp5Q9D7S9 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Chmp5Q9D7S9 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Chmp5Q9D7S9 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Chmp5Q9D7S9 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Chmp5Q9D7S9 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
Chmp5Q9D7S9 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Chmp5Q9D7S9 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Chmp5Q9D7S9 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Chmp5Q9D7S9 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC17.68■□□□□ 0.42
Chmp5Q9D7S9 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Chmp5Q9D7S9 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Chmp5Q9D7S9 Gm38577-201ENSMUST00000221531 4545 ntBASIC17.68■□□□□ 0.42
Chmp5Q9D7S9 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Chmp5Q9D7S9 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC17.68■□□□□ 0.42
Chmp5Q9D7S9 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Chmp5Q9D7S9 AC123645.1-201ENSMUST00000228469 605 ntBASIC17.68■□□□□ 0.42
Chmp5Q9D7S9 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Chmp5Q9D7S9 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Chmp5Q9D7S9 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms