Protein–RNA interactions for Protein: Q9D7F7

Chmp4c, Charged multivesicular body protein 4c, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp4cQ9D7F7 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Chmp4cQ9D7F7 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Chmp4cQ9D7F7 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.3
Chmp4cQ9D7F7 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Chmp4cQ9D7F7 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.3
Chmp4cQ9D7F7 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Chmp4cQ9D7F7 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
Chmp4cQ9D7F7 Gm6756-201ENSMUST00000180647 1620 ntBASIC16.96■□□□□ 0.3
Chmp4cQ9D7F7 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.3
Chmp4cQ9D7F7 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Chmp4cQ9D7F7 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Chmp4cQ9D7F7 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Chmp4cQ9D7F7 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC16.95■□□□□ 0.3
Chmp4cQ9D7F7 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Chmp4cQ9D7F7 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Chmp4cQ9D7F7 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Chmp4cQ9D7F7 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
Chmp4cQ9D7F7 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Chmp4cQ9D7F7 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Chmp4cQ9D7F7 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC16.95■□□□□ 0.3
Chmp4cQ9D7F7 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC16.95■□□□□ 0.3
Chmp4cQ9D7F7 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Chmp4cQ9D7F7 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Chmp4cQ9D7F7 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Chmp4cQ9D7F7 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Chmp4cQ9D7F7 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Chmp4cQ9D7F7 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Chmp4cQ9D7F7 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC16.95■□□□□ 0.3
Chmp4cQ9D7F7 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Chmp4cQ9D7F7 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Chmp4cQ9D7F7 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Chmp4cQ9D7F7 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Chmp4cQ9D7F7 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Chmp4cQ9D7F7 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Chmp4cQ9D7F7 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Chmp4cQ9D7F7 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Chmp4cQ9D7F7 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Chmp4cQ9D7F7 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Chmp4cQ9D7F7 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Chmp4cQ9D7F7 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Chmp4cQ9D7F7 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Chmp4cQ9D7F7 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Chmp4cQ9D7F7 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Chmp4cQ9D7F7 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Chmp4cQ9D7F7 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC16.94■□□□□ 0.3
Chmp4cQ9D7F7 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Chmp4cQ9D7F7 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC16.94■□□□□ 0.3
Chmp4cQ9D7F7 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Chmp4cQ9D7F7 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Chmp4cQ9D7F7 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Chmp4cQ9D7F7 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Chmp4cQ9D7F7 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Chmp4cQ9D7F7 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Chmp4cQ9D7F7 Gm38102-201ENSMUST00000192791 1935 ntBASIC16.94■□□□□ 0.3
Chmp4cQ9D7F7 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Chmp4cQ9D7F7 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC16.94■□□□□ 0.3
Chmp4cQ9D7F7 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC16.93■□□□□ 0.3
Chmp4cQ9D7F7 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Chmp4cQ9D7F7 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Chmp4cQ9D7F7 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Chmp4cQ9D7F7 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC16.93■□□□□ 0.3
Chmp4cQ9D7F7 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Chmp4cQ9D7F7 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC16.93■□□□□ 0.3
Chmp4cQ9D7F7 Gm6973-201ENSMUST00000117080 721 ntBASIC16.93■□□□□ 0.3
Chmp4cQ9D7F7 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Chmp4cQ9D7F7 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
Chmp4cQ9D7F7 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC16.93■□□□□ 0.3
Chmp4cQ9D7F7 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC16.93■□□□□ 0.3
Chmp4cQ9D7F7 Gm17271-201ENSMUST00000165535 355 ntBASIC16.93■□□□□ 0.3
Chmp4cQ9D7F7 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Chmp4cQ9D7F7 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
Chmp4cQ9D7F7 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Chmp4cQ9D7F7 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Chmp4cQ9D7F7 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Chmp4cQ9D7F7 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC16.93■□□□□ 0.3
Chmp4cQ9D7F7 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Chmp4cQ9D7F7 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Chmp4cQ9D7F7 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Chmp4cQ9D7F7 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC16.93■□□□□ 0.3
Chmp4cQ9D7F7 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Chmp4cQ9D7F7 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC16.93■□□□□ 0.3
Chmp4cQ9D7F7 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Chmp4cQ9D7F7 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Chmp4cQ9D7F7 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Chmp4cQ9D7F7 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Chmp4cQ9D7F7 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC16.93■□□□□ 0.3
Chmp4cQ9D7F7 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC16.93■□□□□ 0.3
Chmp4cQ9D7F7 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Chmp4cQ9D7F7 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Chmp4cQ9D7F7 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Chmp4cQ9D7F7 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Chmp4cQ9D7F7 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Chmp4cQ9D7F7 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Chmp4cQ9D7F7 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Chmp4cQ9D7F7 Mypopos-202ENSMUST00000205975 2321 ntBASIC16.92■□□□□ 0.3
Chmp4cQ9D7F7 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Chmp4cQ9D7F7 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Chmp4cQ9D7F7 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Chmp4cQ9D7F7 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Chmp4cQ9D7F7 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms