Protein–RNA interactions for Protein: Q9D0N7

Chaf1b, Chromatin assembly factor 1 subunit B, mousemouse

Predictions only

Length 572 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1bQ9D0N7 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Chaf1bQ9D0N7 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Chaf1bQ9D0N7 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Chaf1bQ9D0N7 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Chaf1bQ9D0N7 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Chaf1bQ9D0N7 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC13.34□□□□□ -0.27
Chaf1bQ9D0N7 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Chaf1bQ9D0N7 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Chaf1bQ9D0N7 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Chaf1bQ9D0N7 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Chaf1bQ9D0N7 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Chaf1bQ9D0N7 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC13.33□□□□□ -0.27
Chaf1bQ9D0N7 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Chaf1bQ9D0N7 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Chaf1bQ9D0N7 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Chaf1bQ9D0N7 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Chaf1bQ9D0N7 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Chaf1bQ9D0N7 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Chaf1bQ9D0N7 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC13.33□□□□□ -0.28
Chaf1bQ9D0N7 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC13.33□□□□□ -0.28
Chaf1bQ9D0N7 Olfr286-202ENSMUST00000205305 969 ntBASIC13.33□□□□□ -0.28
Chaf1bQ9D0N7 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC13.33□□□□□ -0.28
Chaf1bQ9D0N7 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Chaf1bQ9D0N7 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Chaf1bQ9D0N7 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Chaf1bQ9D0N7 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Chaf1bQ9D0N7 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Chaf1bQ9D0N7 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Chaf1bQ9D0N7 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Chaf1bQ9D0N7 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Chaf1bQ9D0N7 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Chaf1bQ9D0N7 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC13.33□□□□□ -0.28
Chaf1bQ9D0N7 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Chaf1bQ9D0N7 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC13.33□□□□□ -0.28
Chaf1bQ9D0N7 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC13.33□□□□□ -0.28
Chaf1bQ9D0N7 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Chaf1bQ9D0N7 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC13.33□□□□□ -0.28
Chaf1bQ9D0N7 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Chaf1bQ9D0N7 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC13.32□□□□□ -0.28
Chaf1bQ9D0N7 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Chaf1bQ9D0N7 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Chaf1bQ9D0N7 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Chaf1bQ9D0N7 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Chaf1bQ9D0N7 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Chaf1bQ9D0N7 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Chaf1bQ9D0N7 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Chaf1bQ9D0N7 Gm11764-201ENSMUST00000120221 623 ntBASIC13.32□□□□□ -0.28
Chaf1bQ9D0N7 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Chaf1bQ9D0N7 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC13.32□□□□□ -0.28
Chaf1bQ9D0N7 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Chaf1bQ9D0N7 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Chaf1bQ9D0N7 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC13.32□□□□□ -0.28
Chaf1bQ9D0N7 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Chaf1bQ9D0N7 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Chaf1bQ9D0N7 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Chaf1bQ9D0N7 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Chaf1bQ9D0N7 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Chaf1bQ9D0N7 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Chaf1bQ9D0N7 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Chaf1bQ9D0N7 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC13.32□□□□□ -0.28
Chaf1bQ9D0N7 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
Chaf1bQ9D0N7 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Chaf1bQ9D0N7 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC13.32□□□□□ -0.28
Chaf1bQ9D0N7 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Chaf1bQ9D0N7 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Chaf1bQ9D0N7 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Chaf1bQ9D0N7 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Chaf1bQ9D0N7 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Chaf1bQ9D0N7 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Chaf1bQ9D0N7 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Chaf1bQ9D0N7 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Chaf1bQ9D0N7 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Chaf1bQ9D0N7 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Chaf1bQ9D0N7 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Chaf1bQ9D0N7 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC13.31□□□□□ -0.28
Chaf1bQ9D0N7 Gm37437-201ENSMUST00000194451 1937 ntBASIC13.31□□□□□ -0.28
Chaf1bQ9D0N7 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Chaf1bQ9D0N7 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Chaf1bQ9D0N7 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Chaf1bQ9D0N7 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Chaf1bQ9D0N7 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Chaf1bQ9D0N7 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Chaf1bQ9D0N7 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Chaf1bQ9D0N7 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Chaf1bQ9D0N7 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Chaf1bQ9D0N7 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Chaf1bQ9D0N7 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Chaf1bQ9D0N7 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC13.31□□□□□ -0.28
Chaf1bQ9D0N7 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Chaf1bQ9D0N7 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Chaf1bQ9D0N7 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC13.31□□□□□ -0.28
Chaf1bQ9D0N7 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC13.31□□□□□ -0.28
Chaf1bQ9D0N7 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Chaf1bQ9D0N7 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Chaf1bQ9D0N7 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Chaf1bQ9D0N7 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Chaf1bQ9D0N7 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Chaf1bQ9D0N7 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Chaf1bQ9D0N7 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Chaf1bQ9D0N7 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 45.8 ms