Protein–RNA interactions for Protein: Q9CZ83

Mrpl55, 39S ribosomal protein L55, mitochondrial, mousemouse

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mrpl55Q9CZ83 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC9.42□□□□□ -0.9
Mrpl55Q9CZ83 Gm20632-201ENSMUST00000176760 2427 ntBASIC9.42□□□□□ -0.9
Mrpl55Q9CZ83 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Mrpl55Q9CZ83 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Mrpl55Q9CZ83 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC9.42□□□□□ -0.9
Mrpl55Q9CZ83 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
Mrpl55Q9CZ83 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Mrpl55Q9CZ83 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Mrpl55Q9CZ83 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Mrpl55Q9CZ83 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Mrpl55Q9CZ83 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Mrpl55Q9CZ83 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Mrpl55Q9CZ83 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Mrpl55Q9CZ83 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC9.41□□□□□ -0.9
Mrpl55Q9CZ83 Myo15-203ENSMUST00000094135 11715 ntAPPRIS ALT2 TSL 5 BASIC9.41□□□□□ -0.9
Mrpl55Q9CZ83 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC9.41□□□□□ -0.9
Mrpl55Q9CZ83 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Mrpl55Q9CZ83 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC9.41□□□□□ -0.9
Mrpl55Q9CZ83 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Mrpl55Q9CZ83 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Mrpl55Q9CZ83 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC9.41□□□□□ -0.9
Mrpl55Q9CZ83 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Mrpl55Q9CZ83 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC9.41□□□□□ -0.9
Mrpl55Q9CZ83 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Mrpl55Q9CZ83 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Mrpl55Q9CZ83 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Mrpl55Q9CZ83 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC9.41□□□□□ -0.9
Mrpl55Q9CZ83 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC9.41□□□□□ -0.9
Mrpl55Q9CZ83 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Mrpl55Q9CZ83 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Mrpl55Q9CZ83 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC9.41□□□□□ -0.9
Mrpl55Q9CZ83 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Mrpl55Q9CZ83 Gm14494-201ENSMUST00000118786 435 ntBASIC9.41□□□□□ -0.9
Mrpl55Q9CZ83 Gm12134-201ENSMUST00000122109 520 ntBASIC9.41□□□□□ -0.9
Mrpl55Q9CZ83 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC9.41□□□□□ -0.9
Mrpl55Q9CZ83 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC9.41□□□□□ -0.9
Mrpl55Q9CZ83 Gm24513-201ENSMUST00000174964 138 ntBASIC9.41□□□□□ -0.9
Mrpl55Q9CZ83 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Mrpl55Q9CZ83 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Mrpl55Q9CZ83 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC9.41□□□□□ -0.9
Mrpl55Q9CZ83 Mir8117-201ENSMUST00000184773 107 ntBASIC9.41□□□□□ -0.9
Mrpl55Q9CZ83 Gm27397-201ENSMUST00000184997 107 ntBASIC9.41□□□□□ -0.9
Mrpl55Q9CZ83 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Mrpl55Q9CZ83 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC9.41□□□□□ -0.9
Mrpl55Q9CZ83 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Mrpl55Q9CZ83 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC9.41□□□□□ -0.9
Mrpl55Q9CZ83 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC9.41□□□□□ -0.9
Mrpl55Q9CZ83 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Mrpl55Q9CZ83 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC9.41□□□□□ -0.9
Mrpl55Q9CZ83 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Mrpl55Q9CZ83 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Mrpl55Q9CZ83 Pcdh10-202ENSMUST00000170695 8234 ntAPPRIS P3 TSL 1 (best) BASIC9.41□□□□□ -0.9
Mrpl55Q9CZ83 Gm9856-201ENSMUST00000217077 2578 ntBASIC9.41□□□□□ -0.9
Mrpl55Q9CZ83 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Mrpl55Q9CZ83 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC9.41□□□□□ -0.9
Mrpl55Q9CZ83 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Mrpl55Q9CZ83 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Mrpl55Q9CZ83 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Mrpl55Q9CZ83 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Mrpl55Q9CZ83 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Mrpl55Q9CZ83 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC9.41□□□□□ -0.9
Mrpl55Q9CZ83 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC9.41□□□□□ -0.9
Mrpl55Q9CZ83 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Mrpl55Q9CZ83 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Mrpl55Q9CZ83 Otof-201ENSMUST00000074171 7129 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Mrpl55Q9CZ83 Mmp14-206ENSMUST00000225641 3238 ntBASIC9.41□□□□□ -0.9
Mrpl55Q9CZ83 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC9.41□□□□□ -0.9
Mrpl55Q9CZ83 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Mrpl55Q9CZ83 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Mrpl55Q9CZ83 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC9.41□□□□□ -0.9
Mrpl55Q9CZ83 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Mrpl55Q9CZ83 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Mrpl55Q9CZ83 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Mrpl55Q9CZ83 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC9.4□□□□□ -0.9
Mrpl55Q9CZ83 Otof-202ENSMUST00000114747 6881 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Mrpl55Q9CZ83 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Mrpl55Q9CZ83 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC9.4□□□□□ -0.9
Mrpl55Q9CZ83 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Mrpl55Q9CZ83 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Mrpl55Q9CZ83 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Mrpl55Q9CZ83 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Mrpl55Q9CZ83 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Mrpl55Q9CZ83 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC9.4□□□□□ -0.9
Mrpl55Q9CZ83 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Mrpl55Q9CZ83 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC9.4□□□□□ -0.9
Mrpl55Q9CZ83 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Mrpl55Q9CZ83 Tat-201ENSMUST00000001720 2375 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Mrpl55Q9CZ83 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC9.4□□□□□ -0.9
Mrpl55Q9CZ83 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC9.4□□□□□ -0.9
Mrpl55Q9CZ83 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC9.4□□□□□ -0.9
Mrpl55Q9CZ83 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Mrpl55Q9CZ83 Gm5682-201ENSMUST00000173402 505 ntBASIC9.4□□□□□ -0.9
Mrpl55Q9CZ83 Mir3113-201ENSMUST00000175478 76 ntBASIC9.4□□□□□ -0.9
Mrpl55Q9CZ83 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC9.4□□□□□ -0.9
Mrpl55Q9CZ83 Gm27702-201ENSMUST00000184512 56 ntBASIC9.4□□□□□ -0.9
Mrpl55Q9CZ83 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC9.4□□□□□ -0.9
Mrpl55Q9CZ83 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Mrpl55Q9CZ83 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Mrpl55Q9CZ83 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Mrpl55Q9CZ83 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC9.4□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms