Protein–RNA interactions for Protein: Q9CQE8

RTRAF, RNA transcription, translation and transport factor protein, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTRAFQ9CQE8 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
RTRAFQ9CQE8 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
RTRAFQ9CQE8 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC11.51□□□□□ -0.57
RTRAFQ9CQE8 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
RTRAFQ9CQE8 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
RTRAFQ9CQE8 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
RTRAFQ9CQE8 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
RTRAFQ9CQE8 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
RTRAFQ9CQE8 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
RTRAFQ9CQE8 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
RTRAFQ9CQE8 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
RTRAFQ9CQE8 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC11.51□□□□□ -0.57
RTRAFQ9CQE8 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
RTRAFQ9CQE8 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
RTRAFQ9CQE8 Gm5837-201ENSMUST00000191844 1369 ntBASIC11.51□□□□□ -0.57
RTRAFQ9CQE8 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC11.51□□□□□ -0.57
RTRAFQ9CQE8 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
RTRAFQ9CQE8 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
RTRAFQ9CQE8 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
RTRAFQ9CQE8 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
RTRAFQ9CQE8 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
RTRAFQ9CQE8 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
RTRAFQ9CQE8 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
RTRAFQ9CQE8 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
RTRAFQ9CQE8 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
RTRAFQ9CQE8 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
RTRAFQ9CQE8 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
RTRAFQ9CQE8 Gm45630-201ENSMUST00000210243 1911 ntBASIC11.5□□□□□ -0.57
RTRAFQ9CQE8 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
RTRAFQ9CQE8 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
RTRAFQ9CQE8 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC11.5□□□□□ -0.57
RTRAFQ9CQE8 Grk6-205ENSMUST00000224653 2976 ntBASIC11.5□□□□□ -0.57
RTRAFQ9CQE8 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
RTRAFQ9CQE8 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC11.5□□□□□ -0.57
RTRAFQ9CQE8 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
RTRAFQ9CQE8 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
RTRAFQ9CQE8 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
RTRAFQ9CQE8 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC11.5□□□□□ -0.57
RTRAFQ9CQE8 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
RTRAFQ9CQE8 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
RTRAFQ9CQE8 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC11.5□□□□□ -0.57
RTRAFQ9CQE8 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
RTRAFQ9CQE8 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
RTRAFQ9CQE8 Gm25016-201ENSMUST00000158399 131 ntBASIC11.5□□□□□ -0.57
RTRAFQ9CQE8 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC11.5□□□□□ -0.57
RTRAFQ9CQE8 Gm9726-201ENSMUST00000180321 678 ntBASIC11.5□□□□□ -0.57
RTRAFQ9CQE8 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC11.5□□□□□ -0.57
RTRAFQ9CQE8 Gm17808-201ENSMUST00000200859 894 ntBASIC11.5□□□□□ -0.57
RTRAFQ9CQE8 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
RTRAFQ9CQE8 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC11.5□□□□□ -0.57
RTRAFQ9CQE8 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
RTRAFQ9CQE8 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
RTRAFQ9CQE8 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC11.5□□□□□ -0.57
RTRAFQ9CQE8 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
RTRAFQ9CQE8 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
RTRAFQ9CQE8 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
RTRAFQ9CQE8 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC11.5□□□□□ -0.57
RTRAFQ9CQE8 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
RTRAFQ9CQE8 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC11.5□□□□□ -0.57
RTRAFQ9CQE8 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC11.5□□□□□ -0.57
RTRAFQ9CQE8 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
RTRAFQ9CQE8 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
RTRAFQ9CQE8 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
RTRAFQ9CQE8 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
RTRAFQ9CQE8 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
RTRAFQ9CQE8 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
RTRAFQ9CQE8 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
RTRAFQ9CQE8 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
RTRAFQ9CQE8 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
RTRAFQ9CQE8 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
RTRAFQ9CQE8 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC11.49□□□□□ -0.57
RTRAFQ9CQE8 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
RTRAFQ9CQE8 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC11.49□□□□□ -0.57
RTRAFQ9CQE8 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC11.49□□□□□ -0.57
RTRAFQ9CQE8 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
RTRAFQ9CQE8 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
RTRAFQ9CQE8 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
RTRAFQ9CQE8 Sptbn2-201ENSMUST00000008991 8251 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
RTRAFQ9CQE8 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
RTRAFQ9CQE8 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
RTRAFQ9CQE8 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
RTRAFQ9CQE8 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
RTRAFQ9CQE8 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
RTRAFQ9CQE8 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
RTRAFQ9CQE8 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
RTRAFQ9CQE8 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
RTRAFQ9CQE8 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
RTRAFQ9CQE8 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
RTRAFQ9CQE8 Gm15565-201ENSMUST00000118890 427 ntBASIC11.49□□□□□ -0.57
RTRAFQ9CQE8 Gm14042-201ENSMUST00000120139 833 ntBASIC11.49□□□□□ -0.57
RTRAFQ9CQE8 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
RTRAFQ9CQE8 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC11.49□□□□□ -0.57
RTRAFQ9CQE8 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
RTRAFQ9CQE8 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
RTRAFQ9CQE8 CT010506.4-201ENSMUST00000225457 351 ntBASIC11.49□□□□□ -0.57
RTRAFQ9CQE8 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
RTRAFQ9CQE8 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
RTRAFQ9CQE8 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC11.49□□□□□ -0.57
RTRAFQ9CQE8 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
RTRAFQ9CQE8 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms