Protein–RNA interactions for Protein: Q99MB1

Tlr3, Toll-like receptor 3, mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tlr3Q99MB1 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Tlr3Q99MB1 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Tlr3Q99MB1 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC15.22■□□□□ 0.03
Tlr3Q99MB1 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Tlr3Q99MB1 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
Tlr3Q99MB1 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Tlr3Q99MB1 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC15.22■□□□□ 0.03
Tlr3Q99MB1 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Tlr3Q99MB1 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Tlr3Q99MB1 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Tlr3Q99MB1 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Tlr3Q99MB1 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Tlr3Q99MB1 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Tlr3Q99MB1 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Tlr3Q99MB1 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC15.21■□□□□ 0.03
Tlr3Q99MB1 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Tlr3Q99MB1 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Tlr3Q99MB1 Gm38102-201ENSMUST00000192791 1935 ntBASIC15.21■□□□□ 0.03
Tlr3Q99MB1 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC15.21■□□□□ 0.03
Tlr3Q99MB1 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Tlr3Q99MB1 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Tlr3Q99MB1 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Tlr3Q99MB1 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Tlr3Q99MB1 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Tlr3Q99MB1 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Tlr3Q99MB1 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Tlr3Q99MB1 Gm45751-201ENSMUST00000210185 1573 ntBASIC15.21■□□□□ 0.03
Tlr3Q99MB1 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Tlr3Q99MB1 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Tlr3Q99MB1 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC15.21■□□□□ 0.03
Tlr3Q99MB1 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC15.21■□□□□ 0.03
Tlr3Q99MB1 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Tlr3Q99MB1 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Tlr3Q99MB1 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC15.21■□□□□ 0.03
Tlr3Q99MB1 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Tlr3Q99MB1 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Tlr3Q99MB1 Gm5745-201ENSMUST00000183748 313 ntBASIC15.21■□□□□ 0.03
Tlr3Q99MB1 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC15.21■□□□□ 0.03
Tlr3Q99MB1 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Tlr3Q99MB1 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Tlr3Q99MB1 Gm37912-201ENSMUST00000191895 3076 ntBASIC15.21■□□□□ 0.03
Tlr3Q99MB1 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Tlr3Q99MB1 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC15.21■□□□□ 0.03
Tlr3Q99MB1 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Tlr3Q99MB1 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Tlr3Q99MB1 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Tlr3Q99MB1 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Tlr3Q99MB1 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Tlr3Q99MB1 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Tlr3Q99MB1 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Tlr3Q99MB1 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Tlr3Q99MB1 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Tlr3Q99MB1 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Tlr3Q99MB1 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Tlr3Q99MB1 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Tlr3Q99MB1 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Tlr3Q99MB1 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Tlr3Q99MB1 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC15.2■□□□□ 0.02
Tlr3Q99MB1 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Tlr3Q99MB1 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Tlr3Q99MB1 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Tlr3Q99MB1 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Tlr3Q99MB1 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Tlr3Q99MB1 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Tlr3Q99MB1 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC15.2■□□□□ 0.02
Tlr3Q99MB1 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Tlr3Q99MB1 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Tlr3Q99MB1 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC15.2■□□□□ 0.02
Tlr3Q99MB1 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Tlr3Q99MB1 Gm44608-201ENSMUST00000206827 855 ntBASIC15.2■□□□□ 0.02
Tlr3Q99MB1 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Tlr3Q99MB1 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Tlr3Q99MB1 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Tlr3Q99MB1 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
Tlr3Q99MB1 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC15.2■□□□□ 0.02
Tlr3Q99MB1 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Tlr3Q99MB1 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Tlr3Q99MB1 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Tlr3Q99MB1 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Tlr3Q99MB1 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Tlr3Q99MB1 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Tlr3Q99MB1 Gm13517-201ENSMUST00000120782 1495 ntBASIC15.2■□□□□ 0.02
Tlr3Q99MB1 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Tlr3Q99MB1 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Tlr3Q99MB1 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Tlr3Q99MB1 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Tlr3Q99MB1 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC15.19■□□□□ 0.02
Tlr3Q99MB1 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Tlr3Q99MB1 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Tlr3Q99MB1 Gm6415-201ENSMUST00000118488 348 ntBASIC15.19■□□□□ 0.02
Tlr3Q99MB1 Gm15693-201ENSMUST00000120470 637 ntBASIC15.19■□□□□ 0.02
Tlr3Q99MB1 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC15.19■□□□□ 0.02
Tlr3Q99MB1 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC15.19■□□□□ 0.02
Tlr3Q99MB1 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Tlr3Q99MB1 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Tlr3Q99MB1 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Tlr3Q99MB1 AC090659.2-201ENSMUST00000225378 1186 ntBASIC15.19■□□□□ 0.02
Tlr3Q99MB1 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Tlr3Q99MB1 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC15.19■□□□□ 0.02
Tlr3Q99MB1 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms