Protein–RNA interactions for Protein: Q91Y08

Pcdhb1, Protocadherin beta 1, mousemouse

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb1Q91Y08 Gm43056-201ENSMUST00000197865 2791 ntBASIC14.73□□□□□ -0.05
Pcdhb1Q91Y08 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdhb1Q91Y08 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdhb1Q91Y08 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Pcdhb1Q91Y08 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdhb1Q91Y08 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdhb1Q91Y08 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdhb1Q91Y08 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdhb1Q91Y08 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdhb1Q91Y08 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC14.73□□□□□ -0.05
Pcdhb1Q91Y08 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdhb1Q91Y08 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC14.73□□□□□ -0.05
Pcdhb1Q91Y08 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Pcdhb1Q91Y08 AA543401-201ENSMUST00000164248 1269 ntBASIC14.73□□□□□ -0.05
Pcdhb1Q91Y08 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC14.73□□□□□ -0.05
Pcdhb1Q91Y08 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC14.73□□□□□ -0.05
Pcdhb1Q91Y08 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Pcdhb1Q91Y08 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdhb1Q91Y08 Mir125a-201ENSMUST00000083545 68 ntBASIC14.73□□□□□ -0.05
Pcdhb1Q91Y08 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdhb1Q91Y08 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdhb1Q91Y08 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC14.73□□□□□ -0.05
Pcdhb1Q91Y08 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdhb1Q91Y08 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdhb1Q91Y08 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdhb1Q91Y08 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdhb1Q91Y08 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdhb1Q91Y08 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdhb1Q91Y08 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdhb1Q91Y08 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdhb1Q91Y08 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdhb1Q91Y08 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC14.72□□□□□ -0.05
Pcdhb1Q91Y08 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdhb1Q91Y08 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdhb1Q91Y08 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdhb1Q91Y08 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdhb1Q91Y08 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdhb1Q91Y08 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdhb1Q91Y08 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdhb1Q91Y08 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdhb1Q91Y08 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdhb1Q91Y08 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdhb1Q91Y08 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC14.72□□□□□ -0.05
Pcdhb1Q91Y08 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdhb1Q91Y08 AC139350.3-201ENSMUST00000226151 420 ntBASIC14.72□□□□□ -0.05
Pcdhb1Q91Y08 AC154621.1-201ENSMUST00000226155 1119 ntBASIC14.72□□□□□ -0.05
Pcdhb1Q91Y08 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
Pcdhb1Q91Y08 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdhb1Q91Y08 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdhb1Q91Y08 Gm9347-201ENSMUST00000211473 1607 ntBASIC14.72□□□□□ -0.05
Pcdhb1Q91Y08 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdhb1Q91Y08 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Pcdhb1Q91Y08 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdhb1Q91Y08 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdhb1Q91Y08 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdhb1Q91Y08 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Pcdhb1Q91Y08 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdhb1Q91Y08 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC14.72□□□□□ -0.05
Pcdhb1Q91Y08 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdhb1Q91Y08 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdhb1Q91Y08 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Pcdhb1Q91Y08 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Pcdhb1Q91Y08 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
Pcdhb1Q91Y08 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Pcdhb1Q91Y08 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC14.71□□□□□ -0.05
Pcdhb1Q91Y08 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Pcdhb1Q91Y08 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Pcdhb1Q91Y08 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC14.71□□□□□ -0.05
Pcdhb1Q91Y08 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC14.71□□□□□ -0.05
Pcdhb1Q91Y08 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Pcdhb1Q91Y08 Mir449b-201ENSMUST00000104833 80 ntBASIC14.71□□□□□ -0.05
Pcdhb1Q91Y08 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Pcdhb1Q91Y08 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC14.71□□□□□ -0.05
Pcdhb1Q91Y08 Gm7774-201ENSMUST00000200064 533 ntBASIC14.71□□□□□ -0.05
Pcdhb1Q91Y08 Gm5779-201ENSMUST00000218467 910 ntBASIC14.71□□□□□ -0.05
Pcdhb1Q91Y08 AC090659.2-201ENSMUST00000225378 1186 ntBASIC14.71□□□□□ -0.05
Pcdhb1Q91Y08 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Pcdhb1Q91Y08 Gm8396-201ENSMUST00000057361 823 ntBASIC14.71□□□□□ -0.05
Pcdhb1Q91Y08 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Pcdhb1Q91Y08 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Pcdhb1Q91Y08 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Pcdhb1Q91Y08 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Pcdhb1Q91Y08 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Pcdhb1Q91Y08 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Pcdhb1Q91Y08 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Pcdhb1Q91Y08 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Pcdhb1Q91Y08 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.06
Pcdhb1Q91Y08 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
Pcdhb1Q91Y08 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC14.71□□□□□ -0.06
Pcdhb1Q91Y08 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Pcdhb1Q91Y08 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdhb1Q91Y08 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdhb1Q91Y08 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdhb1Q91Y08 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdhb1Q91Y08 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC14.7□□□□□ -0.06
Pcdhb1Q91Y08 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdhb1Q91Y08 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdhb1Q91Y08 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdhb1Q91Y08 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC14.7□□□□□ -0.06
Pcdhb1Q91Y08 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 60.4 ms