Protein–RNA interactions for Protein: Q91XZ5

Pcdhb5, Protocadherin beta 5, mousemouse

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb5Q91XZ5 Gm4984-201ENSMUST00000115987 360 ntBASIC16.63■□□□□ 0.25
Pcdhb5Q91XZ5 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC16.63■□□□□ 0.25
Pcdhb5Q91XZ5 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhb5Q91XZ5 Ighv1-51-201ENSMUST00000192903 354 ntBASIC16.63■□□□□ 0.25
Pcdhb5Q91XZ5 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhb5Q91XZ5 Gm19078-201ENSMUST00000206311 727 ntBASIC16.63■□□□□ 0.25
Pcdhb5Q91XZ5 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC16.63■□□□□ 0.25
Pcdhb5Q91XZ5 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhb5Q91XZ5 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhb5Q91XZ5 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhb5Q91XZ5 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhb5Q91XZ5 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhb5Q91XZ5 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC16.63■□□□□ 0.25
Pcdhb5Q91XZ5 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhb5Q91XZ5 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhb5Q91XZ5 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhb5Q91XZ5 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhb5Q91XZ5 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhb5Q91XZ5 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Pcdhb5Q91XZ5 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
Pcdhb5Q91XZ5 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhb5Q91XZ5 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC16.63■□□□□ 0.25
Pcdhb5Q91XZ5 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhb5Q91XZ5 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhb5Q91XZ5 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Pcdhb5Q91XZ5 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhb5Q91XZ5 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhb5Q91XZ5 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhb5Q91XZ5 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhb5Q91XZ5 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhb5Q91XZ5 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhb5Q91XZ5 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhb5Q91XZ5 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
Pcdhb5Q91XZ5 Gm6244-201ENSMUST00000178732 841 ntBASIC16.62■□□□□ 0.25
Pcdhb5Q91XZ5 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC16.62■□□□□ 0.25
Pcdhb5Q91XZ5 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC16.62■□□□□ 0.25
Pcdhb5Q91XZ5 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhb5Q91XZ5 AC153962.4-201ENSMUST00000217878 242 ntBASIC16.62■□□□□ 0.25
Pcdhb5Q91XZ5 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhb5Q91XZ5 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhb5Q91XZ5 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Pcdhb5Q91XZ5 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhb5Q91XZ5 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhb5Q91XZ5 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhb5Q91XZ5 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhb5Q91XZ5 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhb5Q91XZ5 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC16.62■□□□□ 0.25
Pcdhb5Q91XZ5 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhb5Q91XZ5 Gm45630-201ENSMUST00000210243 1911 ntBASIC16.62■□□□□ 0.25
Pcdhb5Q91XZ5 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhb5Q91XZ5 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhb5Q91XZ5 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
Pcdhb5Q91XZ5 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Pcdhb5Q91XZ5 Ssr1-204ENSMUST00000225319 1610 ntBASIC16.61■□□□□ 0.25
Pcdhb5Q91XZ5 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhb5Q91XZ5 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC16.61■□□□□ 0.25
Pcdhb5Q91XZ5 Gm11524-201ENSMUST00000119349 807 ntBASIC16.61■□□□□ 0.25
Pcdhb5Q91XZ5 Gm24420-201ENSMUST00000176676 59 ntBASIC16.61■□□□□ 0.25
Pcdhb5Q91XZ5 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Pcdhb5Q91XZ5 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Pcdhb5Q91XZ5 Gm17794-201ENSMUST00000220252 955 ntBASIC16.61■□□□□ 0.25
Pcdhb5Q91XZ5 AC192088.1-201ENSMUST00000227561 301 ntBASIC16.61■□□□□ 0.25
Pcdhb5Q91XZ5 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhb5Q91XZ5 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhb5Q91XZ5 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhb5Q91XZ5 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhb5Q91XZ5 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhb5Q91XZ5 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhb5Q91XZ5 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
Pcdhb5Q91XZ5 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhb5Q91XZ5 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhb5Q91XZ5 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC16.61■□□□□ 0.25
Pcdhb5Q91XZ5 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Pcdhb5Q91XZ5 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Pcdhb5Q91XZ5 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhb5Q91XZ5 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC16.61■□□□□ 0.25
Pcdhb5Q91XZ5 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhb5Q91XZ5 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhb5Q91XZ5 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhb5Q91XZ5 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhb5Q91XZ5 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC16.61■□□□□ 0.25
Pcdhb5Q91XZ5 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Pcdhb5Q91XZ5 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhb5Q91XZ5 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhb5Q91XZ5 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhb5Q91XZ5 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhb5Q91XZ5 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Pcdhb5Q91XZ5 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhb5Q91XZ5 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhb5Q91XZ5 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhb5Q91XZ5 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhb5Q91XZ5 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhb5Q91XZ5 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhb5Q91XZ5 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhb5Q91XZ5 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhb5Q91XZ5 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhb5Q91XZ5 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhb5Q91XZ5 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Pcdhb5Q91XZ5 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC16.6■□□□□ 0.25
Pcdhb5Q91XZ5 Gm11425-201ENSMUST00000119608 498 ntBASIC16.6■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms