Protein–RNA interactions for Protein: Q91XY5

Pcdhga3, Protocadherin gamma A3, mousemouse

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga3Q91XY5 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdhga3Q91XY5 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdhga3Q91XY5 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdhga3Q91XY5 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdhga3Q91XY5 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdhga3Q91XY5 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdhga3Q91XY5 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
Pcdhga3Q91XY5 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdhga3Q91XY5 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdhga3Q91XY5 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Pcdhga3Q91XY5 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdhga3Q91XY5 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdhga3Q91XY5 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdhga3Q91XY5 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdhga3Q91XY5 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdhga3Q91XY5 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdhga3Q91XY5 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
Pcdhga3Q91XY5 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdhga3Q91XY5 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC12.64□□□□□ -0.39
Pcdhga3Q91XY5 Gm25911-201ENSMUST00000157621 56 ntBASIC12.64□□□□□ -0.39
Pcdhga3Q91XY5 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC12.64□□□□□ -0.39
Pcdhga3Q91XY5 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC12.64□□□□□ -0.39
Pcdhga3Q91XY5 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdhga3Q91XY5 Klk2-ps-201ENSMUST00000205342 571 ntBASIC12.64□□□□□ -0.39
Pcdhga3Q91XY5 Gm18057-201ENSMUST00000208220 503 ntBASIC12.64□□□□□ -0.39
Pcdhga3Q91XY5 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdhga3Q91XY5 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Pcdhga3Q91XY5 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdhga3Q91XY5 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdhga3Q91XY5 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdhga3Q91XY5 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Pcdhga3Q91XY5 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdhga3Q91XY5 Gm37844-201ENSMUST00000192473 4097 ntBASIC12.64□□□□□ -0.39
Pcdhga3Q91XY5 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdhga3Q91XY5 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdhga3Q91XY5 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdhga3Q91XY5 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC12.64□□□□□ -0.39
Pcdhga3Q91XY5 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdhga3Q91XY5 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdhga3Q91XY5 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdhga3Q91XY5 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdhga3Q91XY5 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdhga3Q91XY5 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC12.63□□□□□ -0.39
Pcdhga3Q91XY5 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Pcdhga3Q91XY5 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdhga3Q91XY5 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC12.63□□□□□ -0.39
Pcdhga3Q91XY5 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdhga3Q91XY5 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdhga3Q91XY5 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdhga3Q91XY5 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
Pcdhga3Q91XY5 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdhga3Q91XY5 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC12.63□□□□□ -0.39
Pcdhga3Q91XY5 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdhga3Q91XY5 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdhga3Q91XY5 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdhga3Q91XY5 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdhga3Q91XY5 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC12.63□□□□□ -0.39
Pcdhga3Q91XY5 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC12.63□□□□□ -0.39
Pcdhga3Q91XY5 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC12.63□□□□□ -0.39
Pcdhga3Q91XY5 Gm14042-201ENSMUST00000120139 833 ntBASIC12.63□□□□□ -0.39
Pcdhga3Q91XY5 Mir1895-201ENSMUST00000122615 79 ntBASIC12.63□□□□□ -0.39
Pcdhga3Q91XY5 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdhga3Q91XY5 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdhga3Q91XY5 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC12.63□□□□□ -0.39
Pcdhga3Q91XY5 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC12.63□□□□□ -0.39
Pcdhga3Q91XY5 Rprl2-201ENSMUST00000157150 290 ntBASIC12.63□□□□□ -0.39
Pcdhga3Q91XY5 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC12.63□□□□□ -0.39
Pcdhga3Q91XY5 Gm27494-201ENSMUST00000184735 189 ntBASIC12.63□□□□□ -0.39
Pcdhga3Q91XY5 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC12.63□□□□□ -0.39
Pcdhga3Q91XY5 Gm2213-201ENSMUST00000197485 688 ntBASIC12.63□□□□□ -0.39
Pcdhga3Q91XY5 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC12.63□□□□□ -0.39
Pcdhga3Q91XY5 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC12.63□□□□□ -0.39
Pcdhga3Q91XY5 CT943659.1-201ENSMUST00000215459 326 ntBASIC12.63□□□□□ -0.39
Pcdhga3Q91XY5 Gm5628-201ENSMUST00000222318 1049 ntBASIC12.63□□□□□ -0.39
Pcdhga3Q91XY5 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC12.63□□□□□ -0.39
Pcdhga3Q91XY5 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdhga3Q91XY5 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdhga3Q91XY5 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdhga3Q91XY5 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC12.63□□□□□ -0.39
Pcdhga3Q91XY5 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdhga3Q91XY5 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Pcdhga3Q91XY5 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC12.63□□□□□ -0.39
Pcdhga3Q91XY5 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdhga3Q91XY5 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdhga3Q91XY5 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdhga3Q91XY5 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdhga3Q91XY5 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdhga3Q91XY5 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC12.63□□□□□ -0.39
Pcdhga3Q91XY5 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdhga3Q91XY5 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdhga3Q91XY5 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdhga3Q91XY5 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdhga3Q91XY5 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdhga3Q91XY5 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdhga3Q91XY5 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdhga3Q91XY5 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Pcdhga3Q91XY5 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdhga3Q91XY5 Gm12500-202ENSMUST00000186471 2428 ntBASIC12.62□□□□□ -0.39
Pcdhga3Q91XY5 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC12.62□□□□□ -0.39
Pcdhga3Q91XY5 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 105.6 ms