Protein–RNA interactions for Protein: Q8VIK3

H1foo, Histone H1oo, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H1fooQ8VIK3 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC11.88□□□□□ -0.51
H1fooQ8VIK3 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
H1fooQ8VIK3 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
H1fooQ8VIK3 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC11.88□□□□□ -0.51
H1fooQ8VIK3 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
H1fooQ8VIK3 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
H1fooQ8VIK3 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
H1fooQ8VIK3 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
H1fooQ8VIK3 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC11.88□□□□□ -0.51
H1fooQ8VIK3 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC11.88□□□□□ -0.51
H1fooQ8VIK3 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
H1fooQ8VIK3 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC11.87□□□□□ -0.51
H1fooQ8VIK3 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
H1fooQ8VIK3 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC11.87□□□□□ -0.51
H1fooQ8VIK3 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
H1fooQ8VIK3 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
H1fooQ8VIK3 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
H1fooQ8VIK3 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC11.87□□□□□ -0.51
H1fooQ8VIK3 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
H1fooQ8VIK3 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC11.87□□□□□ -0.51
H1fooQ8VIK3 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
H1fooQ8VIK3 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
H1fooQ8VIK3 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
H1fooQ8VIK3 Gm5763-201ENSMUST00000155951 1530 ntBASIC11.87□□□□□ -0.51
H1fooQ8VIK3 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
H1fooQ8VIK3 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
H1fooQ8VIK3 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
H1fooQ8VIK3 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
H1fooQ8VIK3 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
H1fooQ8VIK3 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC11.87□□□□□ -0.51
H1fooQ8VIK3 Gm2810-201ENSMUST00000118681 990 ntBASIC11.87□□□□□ -0.51
H1fooQ8VIK3 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
H1fooQ8VIK3 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC11.87□□□□□ -0.51
H1fooQ8VIK3 Gm38225-201ENSMUST00000194001 393 ntBASIC11.87□□□□□ -0.51
H1fooQ8VIK3 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC11.87□□□□□ -0.51
H1fooQ8VIK3 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
H1fooQ8VIK3 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
H1fooQ8VIK3 Gm15500-202ENSMUST00000071641 1019 ntBASIC11.87□□□□□ -0.51
H1fooQ8VIK3 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
H1fooQ8VIK3 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC11.87□□□□□ -0.51
H1fooQ8VIK3 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
H1fooQ8VIK3 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
H1fooQ8VIK3 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
H1fooQ8VIK3 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
H1fooQ8VIK3 Gm43399-201ENSMUST00000202546 2374 ntBASIC11.87□□□□□ -0.51
H1fooQ8VIK3 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
H1fooQ8VIK3 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
H1fooQ8VIK3 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
H1fooQ8VIK3 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC11.87□□□□□ -0.51
H1fooQ8VIK3 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
H1fooQ8VIK3 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
H1fooQ8VIK3 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
H1fooQ8VIK3 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
H1fooQ8VIK3 Gm38391-201ENSMUST00000191720 4069 ntBASIC11.87□□□□□ -0.51
H1fooQ8VIK3 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
H1fooQ8VIK3 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
H1fooQ8VIK3 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
H1fooQ8VIK3 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
H1fooQ8VIK3 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
H1fooQ8VIK3 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
H1fooQ8VIK3 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
H1fooQ8VIK3 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
H1fooQ8VIK3 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
H1fooQ8VIK3 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
H1fooQ8VIK3 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
H1fooQ8VIK3 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
H1fooQ8VIK3 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
H1fooQ8VIK3 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
H1fooQ8VIK3 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC11.86□□□□□ -0.51
H1fooQ8VIK3 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
H1fooQ8VIK3 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
H1fooQ8VIK3 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC11.86□□□□□ -0.51
H1fooQ8VIK3 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
H1fooQ8VIK3 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC11.86□□□□□ -0.51
H1fooQ8VIK3 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
H1fooQ8VIK3 Gm8584-201ENSMUST00000171982 758 ntBASIC11.86□□□□□ -0.51
H1fooQ8VIK3 Gm27494-201ENSMUST00000184735 189 ntBASIC11.86□□□□□ -0.51
H1fooQ8VIK3 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC11.86□□□□□ -0.51
H1fooQ8VIK3 AC123645.1-201ENSMUST00000228469 605 ntBASIC11.86□□□□□ -0.51
H1fooQ8VIK3 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
H1fooQ8VIK3 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC11.86□□□□□ -0.51
H1fooQ8VIK3 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
H1fooQ8VIK3 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
H1fooQ8VIK3 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC11.86□□□□□ -0.51
H1fooQ8VIK3 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC11.86□□□□□ -0.51
H1fooQ8VIK3 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
H1fooQ8VIK3 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
H1fooQ8VIK3 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC11.86□□□□□ -0.51
H1fooQ8VIK3 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
H1fooQ8VIK3 AC166574.6-201ENSMUST00000227889 1806 ntBASIC11.86□□□□□ -0.51
H1fooQ8VIK3 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
H1fooQ8VIK3 Ssr1-204ENSMUST00000225319 1610 ntBASIC11.86□□□□□ -0.51
H1fooQ8VIK3 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
H1fooQ8VIK3 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
H1fooQ8VIK3 Gm6018-201ENSMUST00000216090 1306 ntBASIC11.86□□□□□ -0.51
H1fooQ8VIK3 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
H1fooQ8VIK3 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC11.86□□□□□ -0.51
H1fooQ8VIK3 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
H1fooQ8VIK3 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
H1fooQ8VIK3 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms