Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.07
Trim60Q8VI40 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Trim60Q8VI40 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trim60Q8VI40 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trim60Q8VI40 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trim60Q8VI40 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Trim60Q8VI40 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trim60Q8VI40 AC126549.2-201ENSMUST00000223997 1976 ntBASIC14.64□□□□□ -0.07
Trim60Q8VI40 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Trim60Q8VI40 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trim60Q8VI40 Gm6756-201ENSMUST00000180647 1620 ntBASIC14.64□□□□□ -0.07
Trim60Q8VI40 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trim60Q8VI40 AC121801.1-201ENSMUST00000225363 1899 ntBASIC14.64□□□□□ -0.07
Trim60Q8VI40 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trim60Q8VI40 Gm6973-201ENSMUST00000117080 721 ntBASIC14.64□□□□□ -0.07
Trim60Q8VI40 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC14.64□□□□□ -0.07
Trim60Q8VI40 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trim60Q8VI40 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Trim60Q8VI40 Gm44945-201ENSMUST00000206764 1187 ntBASIC14.64□□□□□ -0.07
Trim60Q8VI40 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Trim60Q8VI40 AC174742.1-201ENSMUST00000218272 304 ntBASIC14.64□□□□□ -0.07
Trim60Q8VI40 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trim60Q8VI40 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trim60Q8VI40 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trim60Q8VI40 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
Trim60Q8VI40 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Trim60Q8VI40 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trim60Q8VI40 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trim60Q8VI40 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Trim60Q8VI40 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trim60Q8VI40 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trim60Q8VI40 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trim60Q8VI40 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trim60Q8VI40 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Trim60Q8VI40 Gm11405-201ENSMUST00000118689 1556 ntBASIC14.64□□□□□ -0.07
Trim60Q8VI40 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC14.64□□□□□ -0.07
Trim60Q8VI40 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
Trim60Q8VI40 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trim60Q8VI40 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trim60Q8VI40 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trim60Q8VI40 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trim60Q8VI40 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Trim60Q8VI40 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Trim60Q8VI40 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
Trim60Q8VI40 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC14.63□□□□□ -0.07
Trim60Q8VI40 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Trim60Q8VI40 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Trim60Q8VI40 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trim60Q8VI40 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trim60Q8VI40 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Trim60Q8VI40 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Trim60Q8VI40 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Trim60Q8VI40 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trim60Q8VI40 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC14.63□□□□□ -0.07
Trim60Q8VI40 Gm12892-201ENSMUST00000117367 1146 ntBASIC14.63□□□□□ -0.07
Trim60Q8VI40 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC14.63□□□□□ -0.07
Trim60Q8VI40 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC14.63□□□□□ -0.07
Trim60Q8VI40 Gm9727-201ENSMUST00000161387 555 ntBASIC14.63□□□□□ -0.07
Trim60Q8VI40 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC14.63□□□□□ -0.07
Trim60Q8VI40 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC14.63□□□□□ -0.07
Trim60Q8VI40 Gm44492-201ENSMUST00000197012 141 ntBASIC14.63□□□□□ -0.07
Trim60Q8VI40 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC14.63□□□□□ -0.07
Trim60Q8VI40 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trim60Q8VI40 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trim60Q8VI40 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trim60Q8VI40 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC14.63□□□□□ -0.07
Trim60Q8VI40 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Trim60Q8VI40 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC14.63□□□□□ -0.07
Trim60Q8VI40 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trim60Q8VI40 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trim60Q8VI40 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trim60Q8VI40 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trim60Q8VI40 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trim60Q8VI40 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trim60Q8VI40 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trim60Q8VI40 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Trim60Q8VI40 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trim60Q8VI40 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trim60Q8VI40 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trim60Q8VI40 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trim60Q8VI40 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trim60Q8VI40 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trim60Q8VI40 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Trim60Q8VI40 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trim60Q8VI40 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC14.62□□□□□ -0.07
Trim60Q8VI40 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC14.62□□□□□ -0.07
Trim60Q8VI40 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trim60Q8VI40 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC14.62□□□□□ -0.07
Trim60Q8VI40 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Trim60Q8VI40 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC14.62□□□□□ -0.07
Trim60Q8VI40 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Trim60Q8VI40 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trim60Q8VI40 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC14.62□□□□□ -0.07
Trim60Q8VI40 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC14.62□□□□□ -0.07
Trim60Q8VI40 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trim60Q8VI40 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trim60Q8VI40 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trim60Q8VI40 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trim60Q8VI40 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trim60Q8VI40 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms