Protein–RNA interactions for Protein: Q8R2C9

Vmn1r28, Vomeronasal type-1 receptor, mousemouse

Predictions only

Length 302 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmn1r28Q8R2C9 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vmn1r28Q8R2C9 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Vmn1r28Q8R2C9 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vmn1r28Q8R2C9 Gm12151-201ENSMUST00000121374 290 ntBASIC13.03□□□□□ -0.32
Vmn1r28Q8R2C9 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC13.03□□□□□ -0.32
Vmn1r28Q8R2C9 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Vmn1r28Q8R2C9 Gm20949-201ENSMUST00000206478 952 ntBASIC13.03□□□□□ -0.32
Vmn1r28Q8R2C9 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vmn1r28Q8R2C9 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vmn1r28Q8R2C9 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vmn1r28Q8R2C9 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Vmn1r28Q8R2C9 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC13.03□□□□□ -0.32
Vmn1r28Q8R2C9 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vmn1r28Q8R2C9 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vmn1r28Q8R2C9 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vmn1r28Q8R2C9 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Vmn1r28Q8R2C9 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vmn1r28Q8R2C9 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vmn1r28Q8R2C9 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vmn1r28Q8R2C9 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Vmn1r28Q8R2C9 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Vmn1r28Q8R2C9 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vmn1r28Q8R2C9 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vmn1r28Q8R2C9 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Vmn1r28Q8R2C9 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Vmn1r28Q8R2C9 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Vmn1r28Q8R2C9 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
Vmn1r28Q8R2C9 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC13.02□□□□□ -0.32
Vmn1r28Q8R2C9 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Vmn1r28Q8R2C9 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Vmn1r28Q8R2C9 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Vmn1r28Q8R2C9 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Vmn1r28Q8R2C9 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Vmn1r28Q8R2C9 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Vmn1r28Q8R2C9 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Vmn1r28Q8R2C9 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC13.02□□□□□ -0.33
Vmn1r28Q8R2C9 AC121804.3-201ENSMUST00000223420 295 ntBASIC13.02□□□□□ -0.33
Vmn1r28Q8R2C9 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Vmn1r28Q8R2C9 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Vmn1r28Q8R2C9 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Vmn1r28Q8R2C9 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Vmn1r28Q8R2C9 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Vmn1r28Q8R2C9 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Vmn1r28Q8R2C9 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Vmn1r28Q8R2C9 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Vmn1r28Q8R2C9 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Vmn1r28Q8R2C9 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Vmn1r28Q8R2C9 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Vmn1r28Q8R2C9 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Vmn1r28Q8R2C9 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC13.02□□□□□ -0.33
Vmn1r28Q8R2C9 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Vmn1r28Q8R2C9 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Vmn1r28Q8R2C9 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Vmn1r28Q8R2C9 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC13.02□□□□□ -0.33
Vmn1r28Q8R2C9 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Vmn1r28Q8R2C9 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Vmn1r28Q8R2C9 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Vmn1r28Q8R2C9 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Vmn1r28Q8R2C9 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Vmn1r28Q8R2C9 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Vmn1r28Q8R2C9 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Vmn1r28Q8R2C9 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Vmn1r28Q8R2C9 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Vmn1r28Q8R2C9 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Vmn1r28Q8R2C9 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Vmn1r28Q8R2C9 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Vmn1r28Q8R2C9 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Vmn1r28Q8R2C9 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Vmn1r28Q8R2C9 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Vmn1r28Q8R2C9 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Vmn1r28Q8R2C9 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Vmn1r28Q8R2C9 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC13.01□□□□□ -0.33
Vmn1r28Q8R2C9 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Vmn1r28Q8R2C9 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Vmn1r28Q8R2C9 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Vmn1r28Q8R2C9 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Vmn1r28Q8R2C9 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Vmn1r28Q8R2C9 Gm12428-201ENSMUST00000119844 727 ntBASIC13.01□□□□□ -0.33
Vmn1r28Q8R2C9 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Vmn1r28Q8R2C9 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC13.01□□□□□ -0.33
Vmn1r28Q8R2C9 Mir7023-201ENSMUST00000185093 64 ntBASIC13.01□□□□□ -0.33
Vmn1r28Q8R2C9 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC13.01□□□□□ -0.33
Vmn1r28Q8R2C9 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Vmn1r28Q8R2C9 Gm6916-202ENSMUST00000205523 195 ntBASIC13.01□□□□□ -0.33
Vmn1r28Q8R2C9 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Vmn1r28Q8R2C9 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Vmn1r28Q8R2C9 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Vmn1r28Q8R2C9 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC13.01□□□□□ -0.33
Vmn1r28Q8R2C9 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Vmn1r28Q8R2C9 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Vmn1r28Q8R2C9 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Vmn1r28Q8R2C9 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC13.01□□□□□ -0.33
Vmn1r28Q8R2C9 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Vmn1r28Q8R2C9 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Vmn1r28Q8R2C9 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC13.01□□□□□ -0.33
Vmn1r28Q8R2C9 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Vmn1r28Q8R2C9 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Vmn1r28Q8R2C9 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Vmn1r28Q8R2C9 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Vmn1r28Q8R2C9 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 43.1 ms