Protein–RNA interactions for Protein: Q8R1N4

Nudcd3, NudC domain-containing protein 3, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nudcd3Q8R1N4 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nudcd3Q8R1N4 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Nudcd3Q8R1N4 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC14.17□□□□□ -0.14
Nudcd3Q8R1N4 Gm37230-201ENSMUST00000194491 818 ntBASIC14.17□□□□□ -0.14
Nudcd3Q8R1N4 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC14.17□□□□□ -0.14
Nudcd3Q8R1N4 AV026068-213ENSMUST00000223675 1171 ntBASIC14.17□□□□□ -0.14
Nudcd3Q8R1N4 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nudcd3Q8R1N4 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Nudcd3Q8R1N4 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC14.17□□□□□ -0.14
Nudcd3Q8R1N4 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nudcd3Q8R1N4 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nudcd3Q8R1N4 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nudcd3Q8R1N4 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nudcd3Q8R1N4 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nudcd3Q8R1N4 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Nudcd3Q8R1N4 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC14.17□□□□□ -0.14
Nudcd3Q8R1N4 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nudcd3Q8R1N4 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Nudcd3Q8R1N4 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC14.17□□□□□ -0.14
Nudcd3Q8R1N4 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nudcd3Q8R1N4 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nudcd3Q8R1N4 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Nudcd3Q8R1N4 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Nudcd3Q8R1N4 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC14.16□□□□□ -0.14
Nudcd3Q8R1N4 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Nudcd3Q8R1N4 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nudcd3Q8R1N4 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nudcd3Q8R1N4 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC14.16□□□□□ -0.14
Nudcd3Q8R1N4 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nudcd3Q8R1N4 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nudcd3Q8R1N4 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Nudcd3Q8R1N4 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nudcd3Q8R1N4 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Nudcd3Q8R1N4 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC14.16□□□□□ -0.14
Nudcd3Q8R1N4 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nudcd3Q8R1N4 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC14.16□□□□□ -0.14
Nudcd3Q8R1N4 Gm6184-201ENSMUST00000120403 1261 ntBASIC14.16□□□□□ -0.14
Nudcd3Q8R1N4 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Nudcd3Q8R1N4 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC14.16□□□□□ -0.14
Nudcd3Q8R1N4 Gm45098-201ENSMUST00000207179 657 ntBASIC14.16□□□□□ -0.14
Nudcd3Q8R1N4 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC14.16□□□□□ -0.14
Nudcd3Q8R1N4 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC14.16□□□□□ -0.14
Nudcd3Q8R1N4 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nudcd3Q8R1N4 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
Nudcd3Q8R1N4 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Nudcd3Q8R1N4 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Nudcd3Q8R1N4 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nudcd3Q8R1N4 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nudcd3Q8R1N4 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Nudcd3Q8R1N4 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
Nudcd3Q8R1N4 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Nudcd3Q8R1N4 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Nudcd3Q8R1N4 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nudcd3Q8R1N4 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nudcd3Q8R1N4 Gm15889-202ENSMUST00000212669 2443 ntBASIC14.15□□□□□ -0.14
Nudcd3Q8R1N4 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nudcd3Q8R1N4 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nudcd3Q8R1N4 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nudcd3Q8R1N4 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nudcd3Q8R1N4 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Nudcd3Q8R1N4 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Nudcd3Q8R1N4 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Nudcd3Q8R1N4 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nudcd3Q8R1N4 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Nudcd3Q8R1N4 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nudcd3Q8R1N4 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Nudcd3Q8R1N4 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nudcd3Q8R1N4 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.14
Nudcd3Q8R1N4 Gm7862-201ENSMUST00000121461 292 ntBASIC14.15□□□□□ -0.14
Nudcd3Q8R1N4 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC14.15□□□□□ -0.14
Nudcd3Q8R1N4 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC14.15□□□□□ -0.14
Nudcd3Q8R1N4 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC14.15□□□□□ -0.14
Nudcd3Q8R1N4 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC14.15□□□□□ -0.14
Nudcd3Q8R1N4 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nudcd3Q8R1N4 AC131709.1-201ENSMUST00000224731 1180 ntBASIC14.15□□□□□ -0.14
Nudcd3Q8R1N4 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nudcd3Q8R1N4 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nudcd3Q8R1N4 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nudcd3Q8R1N4 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC14.15□□□□□ -0.14
Nudcd3Q8R1N4 Gm10154-201ENSMUST00000084445 354 ntBASIC14.15□□□□□ -0.14
Nudcd3Q8R1N4 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC14.15□□□□□ -0.14
Nudcd3Q8R1N4 Gm42928-201ENSMUST00000197338 3339 ntBASIC14.15□□□□□ -0.14
Nudcd3Q8R1N4 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Nudcd3Q8R1N4 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nudcd3Q8R1N4 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC14.15□□□□□ -0.14
Nudcd3Q8R1N4 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
Nudcd3Q8R1N4 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC14.15□□□□□ -0.14
Nudcd3Q8R1N4 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nudcd3Q8R1N4 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC14.15□□□□□ -0.14
Nudcd3Q8R1N4 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nudcd3Q8R1N4 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC14.15□□□□□ -0.14
Nudcd3Q8R1N4 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC14.15□□□□□ -0.14
Nudcd3Q8R1N4 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nudcd3Q8R1N4 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Nudcd3Q8R1N4 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Nudcd3Q8R1N4 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Nudcd3Q8R1N4 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nudcd3Q8R1N4 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nudcd3Q8R1N4 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Nudcd3Q8R1N4 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC14.14□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 49.4 ms