Protein–RNA interactions for Protein: Q8CIK8

Rfwd3, E3 ubiquitin-protein ligase RFWD3, mousemouse

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfwd3Q8CIK8 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rfwd3Q8CIK8 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Rfwd3Q8CIK8 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rfwd3Q8CIK8 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rfwd3Q8CIK8 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rfwd3Q8CIK8 Fgf17-202ENSMUST00000227123 1336 ntBASIC13.36□□□□□ -0.27
Rfwd3Q8CIK8 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rfwd3Q8CIK8 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rfwd3Q8CIK8 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Rfwd3Q8CIK8 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Rfwd3Q8CIK8 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Rfwd3Q8CIK8 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rfwd3Q8CIK8 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rfwd3Q8CIK8 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Rfwd3Q8CIK8 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC13.35□□□□□ -0.27
Rfwd3Q8CIK8 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Rfwd3Q8CIK8 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rfwd3Q8CIK8 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC13.35□□□□□ -0.27
Rfwd3Q8CIK8 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Rfwd3Q8CIK8 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rfwd3Q8CIK8 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Rfwd3Q8CIK8 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC13.35□□□□□ -0.27
Rfwd3Q8CIK8 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Rfwd3Q8CIK8 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC13.35□□□□□ -0.27
Rfwd3Q8CIK8 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Rfwd3Q8CIK8 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Rfwd3Q8CIK8 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rfwd3Q8CIK8 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC13.35□□□□□ -0.27
Rfwd3Q8CIK8 AC124732.2-201ENSMUST00000221977 316 ntBASIC13.35□□□□□ -0.27
Rfwd3Q8CIK8 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rfwd3Q8CIK8 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rfwd3Q8CIK8 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Rfwd3Q8CIK8 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rfwd3Q8CIK8 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rfwd3Q8CIK8 Gm43509-201ENSMUST00000196551 2594 ntBASIC13.35□□□□□ -0.27
Rfwd3Q8CIK8 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rfwd3Q8CIK8 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC13.35□□□□□ -0.27
Rfwd3Q8CIK8 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Rfwd3Q8CIK8 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rfwd3Q8CIK8 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC13.35□□□□□ -0.27
Rfwd3Q8CIK8 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Rfwd3Q8CIK8 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rfwd3Q8CIK8 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rfwd3Q8CIK8 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC13.35□□□□□ -0.27
Rfwd3Q8CIK8 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rfwd3Q8CIK8 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rfwd3Q8CIK8 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rfwd3Q8CIK8 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Rfwd3Q8CIK8 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rfwd3Q8CIK8 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rfwd3Q8CIK8 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rfwd3Q8CIK8 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Rfwd3Q8CIK8 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Rfwd3Q8CIK8 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC13.34□□□□□ -0.27
Rfwd3Q8CIK8 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Rfwd3Q8CIK8 AC162938.1-201ENSMUST00000213140 2323 ntBASIC13.34□□□□□ -0.27
Rfwd3Q8CIK8 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rfwd3Q8CIK8 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rfwd3Q8CIK8 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rfwd3Q8CIK8 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rfwd3Q8CIK8 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Rfwd3Q8CIK8 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rfwd3Q8CIK8 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rfwd3Q8CIK8 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC13.34□□□□□ -0.27
Rfwd3Q8CIK8 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Rfwd3Q8CIK8 Gm13616-201ENSMUST00000120600 222 ntBASIC13.34□□□□□ -0.27
Rfwd3Q8CIK8 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC13.34□□□□□ -0.27
Rfwd3Q8CIK8 Gm27430-201ENSMUST00000184585 107 ntBASIC13.34□□□□□ -0.27
Rfwd3Q8CIK8 Gm44333-201ENSMUST00000197168 107 ntBASIC13.34□□□□□ -0.27
Rfwd3Q8CIK8 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rfwd3Q8CIK8 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC13.34□□□□□ -0.27
Rfwd3Q8CIK8 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC13.34□□□□□ -0.27
Rfwd3Q8CIK8 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rfwd3Q8CIK8 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rfwd3Q8CIK8 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rfwd3Q8CIK8 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rfwd3Q8CIK8 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rfwd3Q8CIK8 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rfwd3Q8CIK8 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Rfwd3Q8CIK8 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Rfwd3Q8CIK8 Gm13517-201ENSMUST00000120782 1495 ntBASIC13.34□□□□□ -0.27
Rfwd3Q8CIK8 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
Rfwd3Q8CIK8 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rfwd3Q8CIK8 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Rfwd3Q8CIK8 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Rfwd3Q8CIK8 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rfwd3Q8CIK8 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rfwd3Q8CIK8 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC13.34□□□□□ -0.27
Rfwd3Q8CIK8 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Rfwd3Q8CIK8 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rfwd3Q8CIK8 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Rfwd3Q8CIK8 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC13.34□□□□□ -0.27
Rfwd3Q8CIK8 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC13.33□□□□□ -0.27
Rfwd3Q8CIK8 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC13.33□□□□□ -0.27
Rfwd3Q8CIK8 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Rfwd3Q8CIK8 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rfwd3Q8CIK8 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rfwd3Q8CIK8 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rfwd3Q8CIK8 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rfwd3Q8CIK8 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 74.9 ms