Protein–RNA interactions for Protein: Q8CGC6

Rbm28, RNA-binding protein 28, mousemouse

Known RBP Predictions only

Length 750 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rbm28Q8CGC6 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rbm28Q8CGC6 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rbm28Q8CGC6 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rbm28Q8CGC6 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rbm28Q8CGC6 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Rbm28Q8CGC6 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rbm28Q8CGC6 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Rbm28Q8CGC6 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rbm28Q8CGC6 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rbm28Q8CGC6 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rbm28Q8CGC6 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Rbm28Q8CGC6 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Rbm28Q8CGC6 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC16.73■□□□□ 0.27
Rbm28Q8CGC6 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC16.73■□□□□ 0.27
Rbm28Q8CGC6 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Rbm28Q8CGC6 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Rbm28Q8CGC6 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC16.73■□□□□ 0.27
Rbm28Q8CGC6 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Rbm28Q8CGC6 AC121804.3-201ENSMUST00000223420 295 ntBASIC16.73■□□□□ 0.27
Rbm28Q8CGC6 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rbm28Q8CGC6 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rbm28Q8CGC6 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rbm28Q8CGC6 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rbm28Q8CGC6 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC16.73■□□□□ 0.27
Rbm28Q8CGC6 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Rbm28Q8CGC6 Gm10676-201ENSMUST00000098778 3221 ntBASIC16.73■□□□□ 0.27
Rbm28Q8CGC6 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC16.73■□□□□ 0.27
Rbm28Q8CGC6 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rbm28Q8CGC6 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rbm28Q8CGC6 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Rbm28Q8CGC6 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rbm28Q8CGC6 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rbm28Q8CGC6 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Rbm28Q8CGC6 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rbm28Q8CGC6 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Rbm28Q8CGC6 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC16.72■□□□□ 0.27
Rbm28Q8CGC6 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC16.72■□□□□ 0.27
Rbm28Q8CGC6 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rbm28Q8CGC6 AC162938.1-201ENSMUST00000213140 2323 ntBASIC16.72■□□□□ 0.27
Rbm28Q8CGC6 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Rbm28Q8CGC6 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rbm28Q8CGC6 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Rbm28Q8CGC6 Gm12859-201ENSMUST00000117834 427 ntBASIC16.72■□□□□ 0.27
Rbm28Q8CGC6 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rbm28Q8CGC6 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rbm28Q8CGC6 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC16.72■□□□□ 0.27
Rbm28Q8CGC6 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Rbm28Q8CGC6 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rbm28Q8CGC6 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rbm28Q8CGC6 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rbm28Q8CGC6 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rbm28Q8CGC6 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rbm28Q8CGC6 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rbm28Q8CGC6 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rbm28Q8CGC6 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rbm28Q8CGC6 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rbm28Q8CGC6 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Rbm28Q8CGC6 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Rbm28Q8CGC6 Gm5763-201ENSMUST00000155951 1530 ntBASIC16.71■□□□□ 0.27
Rbm28Q8CGC6 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Rbm28Q8CGC6 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rbm28Q8CGC6 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rbm28Q8CGC6 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Rbm28Q8CGC6 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Rbm28Q8CGC6 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rbm28Q8CGC6 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Rbm28Q8CGC6 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rbm28Q8CGC6 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Rbm28Q8CGC6 Gm22189-201ENSMUST00000103822 86 ntBASIC16.71■□□□□ 0.27
Rbm28Q8CGC6 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rbm28Q8CGC6 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rbm28Q8CGC6 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rbm28Q8CGC6 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC16.71■□□□□ 0.27
Rbm28Q8CGC6 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rbm28Q8CGC6 Gm9522-201ENSMUST00000182394 926 ntBASIC16.71■□□□□ 0.27
Rbm28Q8CGC6 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC16.71■□□□□ 0.27
Rbm28Q8CGC6 AL593843.1-201ENSMUST00000195891 145 ntBASIC16.71■□□□□ 0.27
Rbm28Q8CGC6 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rbm28Q8CGC6 Gm7390-201ENSMUST00000212452 1216 ntBASIC16.71■□□□□ 0.27
Rbm28Q8CGC6 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC16.71■□□□□ 0.27
Rbm28Q8CGC6 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rbm28Q8CGC6 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rbm28Q8CGC6 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Rbm28Q8CGC6 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Rbm28Q8CGC6 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Rbm28Q8CGC6 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rbm28Q8CGC6 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Rbm28Q8CGC6 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rbm28Q8CGC6 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC16.71■□□□□ 0.27
Rbm28Q8CGC6 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
Rbm28Q8CGC6 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rbm28Q8CGC6 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Rbm28Q8CGC6 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC16.71■□□□□ 0.26
Rbm28Q8CGC6 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rbm28Q8CGC6 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rbm28Q8CGC6 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rbm28Q8CGC6 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rbm28Q8CGC6 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rbm28Q8CGC6 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rbm28Q8CGC6 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms