Protein–RNA interactions for Protein: Q8BYH8

Chd9, Chromodomain-helicase-DNA-binding protein 9, mousemouse

Predictions only

Length 2,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd9Q8BYH8 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Chd9Q8BYH8 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Chd9Q8BYH8 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Chd9Q8BYH8 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.64
Chd9Q8BYH8 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Chd9Q8BYH8 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Chd9Q8BYH8 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Chd9Q8BYH8 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.64
Chd9Q8BYH8 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Chd9Q8BYH8 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Chd9Q8BYH8 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Chd9Q8BYH8 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC11.02□□□□□ -0.65
Chd9Q8BYH8 Gm23200-201ENSMUST00000104379 132 ntBASIC11.02□□□□□ -0.65
Chd9Q8BYH8 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Chd9Q8BYH8 Gm25951-201ENSMUST00000175330 64 ntBASIC11.02□□□□□ -0.65
Chd9Q8BYH8 Gm6283-201ENSMUST00000182369 1000 ntBASIC11.02□□□□□ -0.65
Chd9Q8BYH8 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Chd9Q8BYH8 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Chd9Q8BYH8 Gm44100-201ENSMUST00000204329 436 ntBASIC11.02□□□□□ -0.65
Chd9Q8BYH8 Gm6916-202ENSMUST00000205523 195 ntBASIC11.02□□□□□ -0.65
Chd9Q8BYH8 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Chd9Q8BYH8 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Chd9Q8BYH8 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Chd9Q8BYH8 AC132384.14-201ENSMUST00000219346 1147 ntBASIC11.02□□□□□ -0.65
Chd9Q8BYH8 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Chd9Q8BYH8 AC174797.2-202ENSMUST00000225729 568 ntBASIC11.02□□□□□ -0.65
Chd9Q8BYH8 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
Chd9Q8BYH8 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Chd9Q8BYH8 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Chd9Q8BYH8 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Chd9Q8BYH8 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Chd9Q8BYH8 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Chd9Q8BYH8 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Chd9Q8BYH8 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Chd9Q8BYH8 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
Chd9Q8BYH8 CT010478.1-201ENSMUST00000220747 2787 ntBASIC11.02□□□□□ -0.65
Chd9Q8BYH8 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Chd9Q8BYH8 Gm13464-201ENSMUST00000119418 935 ntBASIC11.02□□□□□ -0.65
Chd9Q8BYH8 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Chd9Q8BYH8 Rn7s6-201ENSMUST00000175005 291 ntBASIC11.02□□□□□ -0.65
Chd9Q8BYH8 AC154176.1-201ENSMUST00000225897 220 ntBASIC11.02□□□□□ -0.65
Chd9Q8BYH8 Ufc1-201ENSMUST00000080001 1007 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Chd9Q8BYH8 Drg1-201ENSMUST00000020741 1546 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Chd9Q8BYH8 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Chd9Q8BYH8 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Chd9Q8BYH8 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Chd9Q8BYH8 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC11.01□□□□□ -0.65
Chd9Q8BYH8 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Chd9Q8BYH8 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC11.01□□□□□ -0.65
Chd9Q8BYH8 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Chd9Q8BYH8 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Chd9Q8BYH8 Gm15460-201ENSMUST00000118147 391 ntBASIC11.01□□□□□ -0.65
Chd9Q8BYH8 Cspp1-204ENSMUST00000119714 1268 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Chd9Q8BYH8 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Chd9Q8BYH8 1700003G13Rik-202ENSMUST00000131342 705 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Chd9Q8BYH8 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC11.01□□□□□ -0.65
Chd9Q8BYH8 Sdf2-201ENSMUST00000002133 1268 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Chd9Q8BYH8 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC11.01□□□□□ -0.65
Chd9Q8BYH8 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Chd9Q8BYH8 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Chd9Q8BYH8 Gm5049-201ENSMUST00000195878 1590 ntBASIC11.01□□□□□ -0.65
Chd9Q8BYH8 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Chd9Q8BYH8 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Chd9Q8BYH8 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Chd9Q8BYH8 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Chd9Q8BYH8 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Chd9Q8BYH8 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Chd9Q8BYH8 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Chd9Q8BYH8 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Chd9Q8BYH8 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Chd9Q8BYH8 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Chd9Q8BYH8 Gm15370-201ENSMUST00000117158 253 ntBASIC11.01□□□□□ -0.65
Chd9Q8BYH8 Gm13689-201ENSMUST00000119360 685 ntBASIC11.01□□□□□ -0.65
Chd9Q8BYH8 Gm12715-201ENSMUST00000121430 1128 ntBASIC11.01□□□□□ -0.65
Chd9Q8BYH8 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Chd9Q8BYH8 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC11.01□□□□□ -0.65
Chd9Q8BYH8 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Chd9Q8BYH8 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC11.01□□□□□ -0.65
Chd9Q8BYH8 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Chd9Q8BYH8 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Chd9Q8BYH8 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Chd9Q8BYH8 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Chd9Q8BYH8 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Chd9Q8BYH8 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Chd9Q8BYH8 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Chd9Q8BYH8 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Chd9Q8BYH8 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Chd9Q8BYH8 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC11□□□□□ -0.65
Chd9Q8BYH8 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC11□□□□□ -0.65
Chd9Q8BYH8 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
Chd9Q8BYH8 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Chd9Q8BYH8 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Chd9Q8BYH8 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Chd9Q8BYH8 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Chd9Q8BYH8 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC11□□□□□ -0.65
Chd9Q8BYH8 Gm45760-201ENSMUST00000212190 1782 ntBASIC11□□□□□ -0.65
Chd9Q8BYH8 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
Chd9Q8BYH8 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Chd9Q8BYH8 Gm15240-201ENSMUST00000118156 720 ntBASIC11□□□□□ -0.65
Chd9Q8BYH8 Gm10275-202ENSMUST00000168697 495 ntBASIC11□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 54 ms