Protein–RNA interactions for Protein: Q8BY87

Usp47, Ubiquitin carboxyl-terminal hydrolase 47, mousemouse

Predictions only

Length 1,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp47Q8BY87 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.78
Usp47Q8BY87 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Usp47Q8BY87 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC19.89■□□□□ 0.78
Usp47Q8BY87 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Usp47Q8BY87 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.78
Usp47Q8BY87 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Usp47Q8BY87 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
Usp47Q8BY87 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC19.89■□□□□ 0.77
Usp47Q8BY87 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Usp47Q8BY87 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC19.89■□□□□ 0.77
Usp47Q8BY87 Gm12341-201ENSMUST00000119724 503 ntBASIC19.89■□□□□ 0.77
Usp47Q8BY87 Gm12490-201ENSMUST00000120255 560 ntBASIC19.89■□□□□ 0.77
Usp47Q8BY87 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Usp47Q8BY87 Gm8515-201ENSMUST00000194852 576 ntBASIC19.89■□□□□ 0.77
Usp47Q8BY87 Gm9794-201ENSMUST00000202370 423 ntBASIC19.89■□□□□ 0.77
Usp47Q8BY87 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Usp47Q8BY87 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
Usp47Q8BY87 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Usp47Q8BY87 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Usp47Q8BY87 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Usp47Q8BY87 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Usp47Q8BY87 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Usp47Q8BY87 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Usp47Q8BY87 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Usp47Q8BY87 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Usp47Q8BY87 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Usp47Q8BY87 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Usp47Q8BY87 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Usp47Q8BY87 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Usp47Q8BY87 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Usp47Q8BY87 Gm15376-201ENSMUST00000122258 783 ntBASIC19.88■□□□□ 0.77
Usp47Q8BY87 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Usp47Q8BY87 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC19.88■□□□□ 0.77
Usp47Q8BY87 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC19.88■□□□□ 0.77
Usp47Q8BY87 Gm7558-201ENSMUST00000193221 1165 ntBASIC19.88■□□□□ 0.77
Usp47Q8BY87 Gm7653-201ENSMUST00000214567 508 ntBASIC19.88■□□□□ 0.77
Usp47Q8BY87 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Usp47Q8BY87 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
Usp47Q8BY87 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Usp47Q8BY87 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Usp47Q8BY87 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC19.88■□□□□ 0.77
Usp47Q8BY87 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Usp47Q8BY87 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Usp47Q8BY87 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Usp47Q8BY87 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Usp47Q8BY87 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Usp47Q8BY87 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Usp47Q8BY87 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
Usp47Q8BY87 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Usp47Q8BY87 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Usp47Q8BY87 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC19.87■□□□□ 0.77
Usp47Q8BY87 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Usp47Q8BY87 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Usp47Q8BY87 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Usp47Q8BY87 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Usp47Q8BY87 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Usp47Q8BY87 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC19.87■□□□□ 0.77
Usp47Q8BY87 Gm11424-201ENSMUST00000121929 829 ntBASIC19.87■□□□□ 0.77
Usp47Q8BY87 Gm12138-201ENSMUST00000122180 951 ntBASIC19.87■□□□□ 0.77
Usp47Q8BY87 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Usp47Q8BY87 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Usp47Q8BY87 Gm24420-201ENSMUST00000176676 59 ntBASIC19.87■□□□□ 0.77
Usp47Q8BY87 Gm18018-201ENSMUST00000198273 408 ntBASIC19.87■□□□□ 0.77
Usp47Q8BY87 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC19.87■□□□□ 0.77
Usp47Q8BY87 AC154239.3-201ENSMUST00000226933 674 ntBASIC19.87■□□□□ 0.77
Usp47Q8BY87 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Usp47Q8BY87 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Usp47Q8BY87 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
Usp47Q8BY87 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Usp47Q8BY87 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Usp47Q8BY87 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Usp47Q8BY87 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Usp47Q8BY87 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
Usp47Q8BY87 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC19.87■□□□□ 0.77
Usp47Q8BY87 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Usp47Q8BY87 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
Usp47Q8BY87 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Usp47Q8BY87 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Usp47Q8BY87 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Usp47Q8BY87 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Usp47Q8BY87 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC19.86■□□□□ 0.77
Usp47Q8BY87 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Usp47Q8BY87 Gm6745-201ENSMUST00000199216 526 ntBASIC19.86■□□□□ 0.77
Usp47Q8BY87 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC19.86■□□□□ 0.77
Usp47Q8BY87 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC19.86■□□□□ 0.77
Usp47Q8BY87 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Usp47Q8BY87 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
Usp47Q8BY87 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Usp47Q8BY87 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
Usp47Q8BY87 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC19.86■□□□□ 0.77
Usp47Q8BY87 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Usp47Q8BY87 Zkscan14-203ENSMUST00000198959 2243 ntBASIC19.86■□□□□ 0.77
Usp47Q8BY87 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Usp47Q8BY87 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Usp47Q8BY87 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Usp47Q8BY87 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Usp47Q8BY87 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Usp47Q8BY87 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Usp47Q8BY87 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Usp47Q8BY87 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms