Protein–RNA interactions for Protein: Q8BRF7

Scfd1, Sec1 family domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scfd1Q8BRF7 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Scfd1Q8BRF7 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Scfd1Q8BRF7 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Scfd1Q8BRF7 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Scfd1Q8BRF7 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Scfd1Q8BRF7 Gm28911-201ENSMUST00000188837 117 ntBASIC16.12■□□□□ 0.17
Scfd1Q8BRF7 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC16.12■□□□□ 0.17
Scfd1Q8BRF7 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Scfd1Q8BRF7 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Scfd1Q8BRF7 Mir497b-201ENSMUST00000093601 125 ntBASIC16.12■□□□□ 0.17
Scfd1Q8BRF7 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
Scfd1Q8BRF7 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Scfd1Q8BRF7 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Scfd1Q8BRF7 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Scfd1Q8BRF7 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Scfd1Q8BRF7 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Scfd1Q8BRF7 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Scfd1Q8BRF7 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Scfd1Q8BRF7 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Scfd1Q8BRF7 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Scfd1Q8BRF7 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Scfd1Q8BRF7 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Scfd1Q8BRF7 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Scfd1Q8BRF7 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Scfd1Q8BRF7 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Scfd1Q8BRF7 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Scfd1Q8BRF7 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Scfd1Q8BRF7 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Scfd1Q8BRF7 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Scfd1Q8BRF7 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Scfd1Q8BRF7 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Scfd1Q8BRF7 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC16.11■□□□□ 0.17
Scfd1Q8BRF7 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Scfd1Q8BRF7 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC16.11■□□□□ 0.17
Scfd1Q8BRF7 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC16.11■□□□□ 0.17
Scfd1Q8BRF7 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Scfd1Q8BRF7 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Scfd1Q8BRF7 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Scfd1Q8BRF7 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC16.11■□□□□ 0.17
Scfd1Q8BRF7 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC16.11■□□□□ 0.17
Scfd1Q8BRF7 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC16.11■□□□□ 0.17
Scfd1Q8BRF7 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Scfd1Q8BRF7 CT030704.2-201ENSMUST00000228887 494 ntBASIC16.11■□□□□ 0.17
Scfd1Q8BRF7 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Scfd1Q8BRF7 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Scfd1Q8BRF7 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Scfd1Q8BRF7 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Scfd1Q8BRF7 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Scfd1Q8BRF7 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Scfd1Q8BRF7 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Scfd1Q8BRF7 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Scfd1Q8BRF7 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Scfd1Q8BRF7 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Scfd1Q8BRF7 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC16.11■□□□□ 0.17
Scfd1Q8BRF7 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Scfd1Q8BRF7 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Scfd1Q8BRF7 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Scfd1Q8BRF7 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Scfd1Q8BRF7 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Scfd1Q8BRF7 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Scfd1Q8BRF7 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Scfd1Q8BRF7 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Scfd1Q8BRF7 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
Scfd1Q8BRF7 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Scfd1Q8BRF7 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Scfd1Q8BRF7 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Scfd1Q8BRF7 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Scfd1Q8BRF7 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Scfd1Q8BRF7 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Scfd1Q8BRF7 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Scfd1Q8BRF7 Gm15806-201ENSMUST00000120696 955 ntBASIC16.1■□□□□ 0.17
Scfd1Q8BRF7 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Scfd1Q8BRF7 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Scfd1Q8BRF7 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC16.1■□□□□ 0.17
Scfd1Q8BRF7 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC16.1■□□□□ 0.17
Scfd1Q8BRF7 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Scfd1Q8BRF7 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC16.1■□□□□ 0.17
Scfd1Q8BRF7 Gm43094-201ENSMUST00000196549 921 ntBASIC16.1■□□□□ 0.17
Scfd1Q8BRF7 Gm19078-201ENSMUST00000206311 727 ntBASIC16.1■□□□□ 0.17
Scfd1Q8BRF7 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Scfd1Q8BRF7 AC155252.1-201ENSMUST00000226462 1208 ntBASIC16.1■□□□□ 0.17
Scfd1Q8BRF7 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Scfd1Q8BRF7 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Scfd1Q8BRF7 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Scfd1Q8BRF7 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Scfd1Q8BRF7 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC16.1■□□□□ 0.17
Scfd1Q8BRF7 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Scfd1Q8BRF7 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Scfd1Q8BRF7 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Scfd1Q8BRF7 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Scfd1Q8BRF7 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Scfd1Q8BRF7 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Scfd1Q8BRF7 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Scfd1Q8BRF7 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Scfd1Q8BRF7 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Scfd1Q8BRF7 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Scfd1Q8BRF7 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Scfd1Q8BRF7 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Scfd1Q8BRF7 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Scfd1Q8BRF7 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms