Protein–RNA interactions for Protein: Q8BKX6

Smg1, Serine/threonine-protein kinase SMG1, mousemouse

Known RBP Predictions only

Length 3,658 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smg1Q8BKX6 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Smg1Q8BKX6 Gm16479-201ENSMUST00000121706 932 ntBASIC11.74□□□□□ -0.53
Smg1Q8BKX6 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
Smg1Q8BKX6 Gm43094-201ENSMUST00000196549 921 ntBASIC11.74□□□□□ -0.53
Smg1Q8BKX6 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Smg1Q8BKX6 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Smg1Q8BKX6 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Smg1Q8BKX6 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Smg1Q8BKX6 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Smg1Q8BKX6 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Smg1Q8BKX6 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Smg1Q8BKX6 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Smg1Q8BKX6 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Smg1Q8BKX6 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Smg1Q8BKX6 Gm12241-201ENSMUST00000118330 726 ntBASIC11.74□□□□□ -0.53
Smg1Q8BKX6 Gm37835-201ENSMUST00000193305 361 ntBASIC11.74□□□□□ -0.53
Smg1Q8BKX6 Gm4971-201ENSMUST00000205991 1108 ntBASIC11.74□□□□□ -0.53
Smg1Q8BKX6 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC11.74□□□□□ -0.53
Smg1Q8BKX6 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Smg1Q8BKX6 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Smg1Q8BKX6 Srp19-201ENSMUST00000072576 876 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Smg1Q8BKX6 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Smg1Q8BKX6 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Smg1Q8BKX6 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Smg1Q8BKX6 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Smg1Q8BKX6 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
Smg1Q8BKX6 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Smg1Q8BKX6 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Smg1Q8BKX6 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC11.73□□□□□ -0.53
Smg1Q8BKX6 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC11.73□□□□□ -0.53
Smg1Q8BKX6 Gm4271-201ENSMUST00000174444 973 ntBASIC11.73□□□□□ -0.53
Smg1Q8BKX6 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Smg1Q8BKX6 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Smg1Q8BKX6 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Smg1Q8BKX6 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Smg1Q8BKX6 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Smg1Q8BKX6 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Smg1Q8BKX6 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC11.73□□□□□ -0.53
Smg1Q8BKX6 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Smg1Q8BKX6 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Smg1Q8BKX6 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Smg1Q8BKX6 AC115735.4-201ENSMUST00000227460 1944 ntBASIC11.73□□□□□ -0.53
Smg1Q8BKX6 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Smg1Q8BKX6 Gm7046-201ENSMUST00000221351 977 ntBASIC11.73□□□□□ -0.53
Smg1Q8BKX6 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Smg1Q8BKX6 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Smg1Q8BKX6 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Smg1Q8BKX6 Gm20632-201ENSMUST00000176760 2427 ntBASIC11.73□□□□□ -0.53
Smg1Q8BKX6 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Smg1Q8BKX6 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Smg1Q8BKX6 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Smg1Q8BKX6 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Smg1Q8BKX6 Gm37411-201ENSMUST00000194180 2282 ntBASIC11.73□□□□□ -0.53
Smg1Q8BKX6 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Smg1Q8BKX6 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC11.73□□□□□ -0.53
Smg1Q8BKX6 AC155237.1-201ENSMUST00000226196 1279 ntBASIC11.73□□□□□ -0.53
Smg1Q8BKX6 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC11.73□□□□□ -0.53
Smg1Q8BKX6 Fam92b-201ENSMUST00000048786 1187 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Smg1Q8BKX6 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Smg1Q8BKX6 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC11.73□□□□□ -0.53
Smg1Q8BKX6 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC11.73□□□□□ -0.53
Smg1Q8BKX6 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Smg1Q8BKX6 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Smg1Q8BKX6 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Smg1Q8BKX6 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Smg1Q8BKX6 Gm5869-201ENSMUST00000200248 1257 ntBASIC11.72□□□□□ -0.53
Smg1Q8BKX6 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC11.72□□□□□ -0.53
Smg1Q8BKX6 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Smg1Q8BKX6 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Smg1Q8BKX6 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Smg1Q8BKX6 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Smg1Q8BKX6 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Smg1Q8BKX6 Gm45760-201ENSMUST00000212190 1782 ntBASIC11.72□□□□□ -0.53
Smg1Q8BKX6 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC11.72□□□□□ -0.53
Smg1Q8BKX6 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
Smg1Q8BKX6 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Smg1Q8BKX6 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Smg1Q8BKX6 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Smg1Q8BKX6 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Smg1Q8BKX6 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Smg1Q8BKX6 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
Smg1Q8BKX6 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC11.72□□□□□ -0.53
Smg1Q8BKX6 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Smg1Q8BKX6 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Smg1Q8BKX6 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Smg1Q8BKX6 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Smg1Q8BKX6 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Smg1Q8BKX6 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Smg1Q8BKX6 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Smg1Q8BKX6 Gm12566-201ENSMUST00000121479 359 ntBASIC11.72□□□□□ -0.53
Smg1Q8BKX6 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Smg1Q8BKX6 Net1-206ENSMUST00000222504 447 ntTSL 3 BASIC11.72□□□□□ -0.53
Smg1Q8BKX6 AC122371.3-201ENSMUST00000223402 1061 ntBASIC11.72□□□□□ -0.53
Smg1Q8BKX6 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Smg1Q8BKX6 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Smg1Q8BKX6 Gm9252-201ENSMUST00000172364 1602 ntBASIC11.72□□□□□ -0.53
Smg1Q8BKX6 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC11.72□□□□□ -0.53
Smg1Q8BKX6 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
Smg1Q8BKX6 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Smg1Q8BKX6 Gm16168-201ENSMUST00000161091 1359 ntTSL 3 BASIC11.71□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms