Protein–RNA interactions for Protein: Q8BI21

Rnf38, E3 ubiquitin-protein ligase RNF38, mousemouse

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf38Q8BI21 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rnf38Q8BI21 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rnf38Q8BI21 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC13.69□□□□□ -0.22
Rnf38Q8BI21 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rnf38Q8BI21 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rnf38Q8BI21 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Rnf38Q8BI21 Gm20553-201ENSMUST00000204205 844 ntBASIC13.69□□□□□ -0.22
Rnf38Q8BI21 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Rnf38Q8BI21 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rnf38Q8BI21 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
Rnf38Q8BI21 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rnf38Q8BI21 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rnf38Q8BI21 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Rnf38Q8BI21 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rnf38Q8BI21 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rnf38Q8BI21 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Rnf38Q8BI21 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rnf38Q8BI21 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Rnf38Q8BI21 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Rnf38Q8BI21 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rnf38Q8BI21 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rnf38Q8BI21 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Rnf38Q8BI21 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC13.68□□□□□ -0.22
Rnf38Q8BI21 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC13.68□□□□□ -0.22
Rnf38Q8BI21 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rnf38Q8BI21 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rnf38Q8BI21 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rnf38Q8BI21 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rnf38Q8BI21 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rnf38Q8BI21 Gm4780-202ENSMUST00000215200 2644 ntBASIC13.68□□□□□ -0.22
Rnf38Q8BI21 Gm12020-201ENSMUST00000119030 2042 ntBASIC13.68□□□□□ -0.22
Rnf38Q8BI21 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rnf38Q8BI21 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rnf38Q8BI21 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rnf38Q8BI21 Gm13410-201ENSMUST00000117058 1415 ntBASIC13.68□□□□□ -0.22
Rnf38Q8BI21 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rnf38Q8BI21 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Rnf38Q8BI21 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Rnf38Q8BI21 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
Rnf38Q8BI21 Gm11779-201ENSMUST00000118541 368 ntBASIC13.68□□□□□ -0.22
Rnf38Q8BI21 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rnf38Q8BI21 Gm27920-201ENSMUST00000183953 96 ntBASIC13.68□□□□□ -0.22
Rnf38Q8BI21 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rnf38Q8BI21 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rnf38Q8BI21 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Rnf38Q8BI21 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rnf38Q8BI21 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Rnf38Q8BI21 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Rnf38Q8BI21 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Rnf38Q8BI21 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rnf38Q8BI21 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC13.68□□□□□ -0.22
Rnf38Q8BI21 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Rnf38Q8BI21 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rnf38Q8BI21 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rnf38Q8BI21 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Rnf38Q8BI21 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rnf38Q8BI21 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rnf38Q8BI21 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rnf38Q8BI21 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rnf38Q8BI21 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC13.67□□□□□ -0.22
Rnf38Q8BI21 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC13.67□□□□□ -0.22
Rnf38Q8BI21 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Rnf38Q8BI21 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rnf38Q8BI21 Gm15467-201ENSMUST00000120582 445 ntBASIC13.67□□□□□ -0.22
Rnf38Q8BI21 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Rnf38Q8BI21 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC13.67□□□□□ -0.22
Rnf38Q8BI21 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC13.67□□□□□ -0.22
Rnf38Q8BI21 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC13.67□□□□□ -0.22
Rnf38Q8BI21 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC13.67□□□□□ -0.22
Rnf38Q8BI21 Rpph1-201ENSMUST00000175096 319 ntBASIC13.67□□□□□ -0.22
Rnf38Q8BI21 Mir8117-201ENSMUST00000184773 107 ntBASIC13.67□□□□□ -0.22
Rnf38Q8BI21 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC13.67□□□□□ -0.22
Rnf38Q8BI21 Gm44492-201ENSMUST00000197012 141 ntBASIC13.67□□□□□ -0.22
Rnf38Q8BI21 Gm45683-201ENSMUST00000210825 1247 ntBASIC13.67□□□□□ -0.22
Rnf38Q8BI21 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Rnf38Q8BI21 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Rnf38Q8BI21 AC174742.1-201ENSMUST00000218272 304 ntBASIC13.67□□□□□ -0.22
Rnf38Q8BI21 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC13.67□□□□□ -0.22
Rnf38Q8BI21 AC090659.1-201ENSMUST00000224334 768 ntBASIC13.67□□□□□ -0.22
Rnf38Q8BI21 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC13.67□□□□□ -0.22
Rnf38Q8BI21 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rnf38Q8BI21 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rnf38Q8BI21 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rnf38Q8BI21 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rnf38Q8BI21 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC13.67□□□□□ -0.22
Rnf38Q8BI21 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rnf38Q8BI21 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rnf38Q8BI21 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rnf38Q8BI21 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rnf38Q8BI21 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rnf38Q8BI21 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Rnf38Q8BI21 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rnf38Q8BI21 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rnf38Q8BI21 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rnf38Q8BI21 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rnf38Q8BI21 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Rnf38Q8BI21 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rnf38Q8BI21 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
Rnf38Q8BI21 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Rnf38Q8BI21 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms