Protein–RNA interactions for Protein: Q80ZI1

Trnp1, TMF-regulated nuclear protein 1, mousemouse

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trnp1Q80ZI1 Gm43758-201ENSMUST00000199500 367 ntBASIC15.84■□□□□ 0.13
Trnp1Q80ZI1 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trnp1Q80ZI1 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Trnp1Q80ZI1 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trnp1Q80ZI1 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trnp1Q80ZI1 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trnp1Q80ZI1 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
Trnp1Q80ZI1 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Trnp1Q80ZI1 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC15.84■□□□□ 0.13
Trnp1Q80ZI1 Gm13730-201ENSMUST00000121036 1462 ntBASIC15.84■□□□□ 0.13
Trnp1Q80ZI1 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Trnp1Q80ZI1 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Trnp1Q80ZI1 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC15.83■□□□□ 0.13
Trnp1Q80ZI1 AC174678.1-201ENSMUST00000228007 2749 ntBASIC15.83■□□□□ 0.13
Trnp1Q80ZI1 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC15.83■□□□□ 0.13
Trnp1Q80ZI1 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Trnp1Q80ZI1 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC15.83■□□□□ 0.13
Trnp1Q80ZI1 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
Trnp1Q80ZI1 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trnp1Q80ZI1 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trnp1Q80ZI1 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trnp1Q80ZI1 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC15.83■□□□□ 0.12
Trnp1Q80ZI1 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
Trnp1Q80ZI1 Rn7s1-201ENSMUST00000174924 300 ntBASIC15.83■□□□□ 0.12
Trnp1Q80ZI1 Rn7s2-201ENSMUST00000175032 300 ntBASIC15.83■□□□□ 0.12
Trnp1Q80ZI1 Gm26461-201ENSMUST00000175064 290 ntBASIC15.83■□□□□ 0.12
Trnp1Q80ZI1 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC15.83■□□□□ 0.12
Trnp1Q80ZI1 AC140406.1-201ENSMUST00000226481 465 ntBASIC15.83■□□□□ 0.12
Trnp1Q80ZI1 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trnp1Q80ZI1 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trnp1Q80ZI1 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC15.83■□□□□ 0.12
Trnp1Q80ZI1 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC15.83■□□□□ 0.12
Trnp1Q80ZI1 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trnp1Q80ZI1 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trnp1Q80ZI1 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trnp1Q80ZI1 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trnp1Q80ZI1 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trnp1Q80ZI1 Mir698-201ENSMUST00000102164 109 ntBASIC15.82■□□□□ 0.12
Trnp1Q80ZI1 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Trnp1Q80ZI1 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC15.82■□□□□ 0.12
Trnp1Q80ZI1 Gm29199-201ENSMUST00000187766 775 ntBASIC15.82■□□□□ 0.12
Trnp1Q80ZI1 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC15.82■□□□□ 0.12
Trnp1Q80ZI1 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Trnp1Q80ZI1 Gm7619-201ENSMUST00000210649 1282 ntBASIC15.82■□□□□ 0.12
Trnp1Q80ZI1 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC15.82■□□□□ 0.12
Trnp1Q80ZI1 Itm2b-204ENSMUST00000228637 783 ntBASIC15.82■□□□□ 0.12
Trnp1Q80ZI1 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC15.82■□□□□ 0.12
Trnp1Q80ZI1 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trnp1Q80ZI1 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trnp1Q80ZI1 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trnp1Q80ZI1 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trnp1Q80ZI1 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Trnp1Q80ZI1 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trnp1Q80ZI1 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trnp1Q80ZI1 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Trnp1Q80ZI1 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trnp1Q80ZI1 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trnp1Q80ZI1 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Trnp1Q80ZI1 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Trnp1Q80ZI1 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trnp1Q80ZI1 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC15.81■□□□□ 0.12
Trnp1Q80ZI1 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Trnp1Q80ZI1 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trnp1Q80ZI1 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trnp1Q80ZI1 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Trnp1Q80ZI1 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trnp1Q80ZI1 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trnp1Q80ZI1 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC15.81■□□□□ 0.12
Trnp1Q80ZI1 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC15.81■□□□□ 0.12
Trnp1Q80ZI1 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Trnp1Q80ZI1 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Trnp1Q80ZI1 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trnp1Q80ZI1 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Trnp1Q80ZI1 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC15.81■□□□□ 0.12
Trnp1Q80ZI1 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trnp1Q80ZI1 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trnp1Q80ZI1 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trnp1Q80ZI1 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trnp1Q80ZI1 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trnp1Q80ZI1 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trnp1Q80ZI1 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Trnp1Q80ZI1 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trnp1Q80ZI1 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC15.81■□□□□ 0.12
Trnp1Q80ZI1 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Trnp1Q80ZI1 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trnp1Q80ZI1 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trnp1Q80ZI1 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trnp1Q80ZI1 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Trnp1Q80ZI1 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trnp1Q80ZI1 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trnp1Q80ZI1 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Trnp1Q80ZI1 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trnp1Q80ZI1 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Trnp1Q80ZI1 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trnp1Q80ZI1 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trnp1Q80ZI1 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trnp1Q80ZI1 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Trnp1Q80ZI1 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trnp1Q80ZI1 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trnp1Q80ZI1 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms