Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Ddx55Q6ZPL9 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ddx55Q6ZPL9 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ddx55Q6ZPL9 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ddx55Q6ZPL9 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Ddx55Q6ZPL9 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC16.01■□□□□ 0.15
Ddx55Q6ZPL9 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Ddx55Q6ZPL9 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ddx55Q6ZPL9 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ddx55Q6ZPL9 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ddx55Q6ZPL9 Proscos-202ENSMUST00000178990 666 ntBASIC16.01■□□□□ 0.15
Ddx55Q6ZPL9 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
Ddx55Q6ZPL9 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC16.01■□□□□ 0.15
Ddx55Q6ZPL9 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Ddx55Q6ZPL9 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ddx55Q6ZPL9 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC16.01■□□□□ 0.15
Ddx55Q6ZPL9 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC16.01■□□□□ 0.15
Ddx55Q6ZPL9 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Ddx55Q6ZPL9 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ddx55Q6ZPL9 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Ddx55Q6ZPL9 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Ddx55Q6ZPL9 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ddx55Q6ZPL9 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ddx55Q6ZPL9 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Ddx55Q6ZPL9 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ddx55Q6ZPL9 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Ddx55Q6ZPL9 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC16■□□□□ 0.15
Ddx55Q6ZPL9 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Ddx55Q6ZPL9 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Ddx55Q6ZPL9 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Ddx55Q6ZPL9 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC16■□□□□ 0.15
Ddx55Q6ZPL9 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Ddx55Q6ZPL9 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC16■□□□□ 0.15
Ddx55Q6ZPL9 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Ddx55Q6ZPL9 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Ddx55Q6ZPL9 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Ddx55Q6ZPL9 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC16■□□□□ 0.15
Ddx55Q6ZPL9 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC16■□□□□ 0.15
Ddx55Q6ZPL9 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC16■□□□□ 0.15
Ddx55Q6ZPL9 Gm8810-201ENSMUST00000172895 754 ntBASIC16■□□□□ 0.15
Ddx55Q6ZPL9 Gm6013-201ENSMUST00000212264 699 ntBASIC16■□□□□ 0.15
Ddx55Q6ZPL9 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Ddx55Q6ZPL9 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Ddx55Q6ZPL9 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC16■□□□□ 0.15
Ddx55Q6ZPL9 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Ddx55Q6ZPL9 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC16■□□□□ 0.15
Ddx55Q6ZPL9 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Ddx55Q6ZPL9 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC16■□□□□ 0.15
Ddx55Q6ZPL9 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Ddx55Q6ZPL9 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC16■□□□□ 0.15
Ddx55Q6ZPL9 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC16■□□□□ 0.15
Ddx55Q6ZPL9 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Ddx55Q6ZPL9 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Ddx55Q6ZPL9 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Ddx55Q6ZPL9 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ddx55Q6ZPL9 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ddx55Q6ZPL9 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ddx55Q6ZPL9 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
Ddx55Q6ZPL9 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ddx55Q6ZPL9 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ddx55Q6ZPL9 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ddx55Q6ZPL9 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Ddx55Q6ZPL9 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Ddx55Q6ZPL9 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
Ddx55Q6ZPL9 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ddx55Q6ZPL9 Gm2639-201ENSMUST00000156881 1297 ntBASIC15.99■□□□□ 0.15
Ddx55Q6ZPL9 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Ddx55Q6ZPL9 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC15.99■□□□□ 0.15
Ddx55Q6ZPL9 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Ddx55Q6ZPL9 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ddx55Q6ZPL9 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
Ddx55Q6ZPL9 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ddx55Q6ZPL9 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC15.99■□□□□ 0.15
Ddx55Q6ZPL9 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Ddx55Q6ZPL9 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Ddx55Q6ZPL9 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ddx55Q6ZPL9 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ddx55Q6ZPL9 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ddx55Q6ZPL9 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ddx55Q6ZPL9 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ddx55Q6ZPL9 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
Ddx55Q6ZPL9 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC15.98■□□□□ 0.15
Ddx55Q6ZPL9 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ddx55Q6ZPL9 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ddx55Q6ZPL9 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ddx55Q6ZPL9 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ddx55Q6ZPL9 AC115735.4-201ENSMUST00000227460 1944 ntBASIC15.98■□□□□ 0.15
Ddx55Q6ZPL9 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC15.98■□□□□ 0.15
Ddx55Q6ZPL9 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ddx55Q6ZPL9 Gm6152-201ENSMUST00000151704 340 ntBASIC15.98■□□□□ 0.15
Ddx55Q6ZPL9 Gm8801-201ENSMUST00000173255 1064 ntBASIC15.98■□□□□ 0.15
Ddx55Q6ZPL9 Gm27331-201ENSMUST00000183705 60 ntBASIC15.98■□□□□ 0.15
Ddx55Q6ZPL9 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Ddx55Q6ZPL9 Gm37305-201ENSMUST00000195714 4279 ntBASIC15.98■□□□□ 0.15
Ddx55Q6ZPL9 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
Ddx55Q6ZPL9 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
Ddx55Q6ZPL9 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Ddx55Q6ZPL9 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ddx55Q6ZPL9 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Ddx55Q6ZPL9 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms