Protein–RNA interactions for Protein: Q6P2L7

Casc4, Protein CASC4, mousemouse

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Casc4Q6P2L7 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
Casc4Q6P2L7 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Casc4Q6P2L7 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Casc4Q6P2L7 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Casc4Q6P2L7 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Casc4Q6P2L7 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Casc4Q6P2L7 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC14.37□□□□□ -0.11
Casc4Q6P2L7 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Casc4Q6P2L7 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Casc4Q6P2L7 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Casc4Q6P2L7 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
Casc4Q6P2L7 Gm4081-201ENSMUST00000195287 1838 ntBASIC14.37□□□□□ -0.11
Casc4Q6P2L7 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC14.37□□□□□ -0.11
Casc4Q6P2L7 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
Casc4Q6P2L7 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC14.37□□□□□ -0.11
Casc4Q6P2L7 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Casc4Q6P2L7 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
Casc4Q6P2L7 Gm44872-201ENSMUST00000207864 420 ntBASIC14.37□□□□□ -0.11
Casc4Q6P2L7 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC14.37□□□□□ -0.11
Casc4Q6P2L7 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Casc4Q6P2L7 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Casc4Q6P2L7 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Casc4Q6P2L7 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Casc4Q6P2L7 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Casc4Q6P2L7 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC14.37□□□□□ -0.11
Casc4Q6P2L7 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Casc4Q6P2L7 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Casc4Q6P2L7 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Casc4Q6P2L7 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Casc4Q6P2L7 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Casc4Q6P2L7 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Casc4Q6P2L7 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Casc4Q6P2L7 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Casc4Q6P2L7 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Casc4Q6P2L7 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Casc4Q6P2L7 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Casc4Q6P2L7 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC14.37□□□□□ -0.11
Casc4Q6P2L7 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Casc4Q6P2L7 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Casc4Q6P2L7 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Casc4Q6P2L7 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Casc4Q6P2L7 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Casc4Q6P2L7 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC14.36□□□□□ -0.11
Casc4Q6P2L7 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Casc4Q6P2L7 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Casc4Q6P2L7 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Casc4Q6P2L7 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Casc4Q6P2L7 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Casc4Q6P2L7 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Casc4Q6P2L7 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Casc4Q6P2L7 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Casc4Q6P2L7 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Casc4Q6P2L7 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC14.36□□□□□ -0.11
Casc4Q6P2L7 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Casc4Q6P2L7 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Casc4Q6P2L7 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC14.36□□□□□ -0.11
Casc4Q6P2L7 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Casc4Q6P2L7 Gm7336-201ENSMUST00000107041 1232 ntBASIC14.36□□□□□ -0.11
Casc4Q6P2L7 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC14.36□□□□□ -0.11
Casc4Q6P2L7 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Casc4Q6P2L7 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Casc4Q6P2L7 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Casc4Q6P2L7 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC14.36□□□□□ -0.11
Casc4Q6P2L7 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Casc4Q6P2L7 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Casc4Q6P2L7 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Casc4Q6P2L7 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Casc4Q6P2L7 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Casc4Q6P2L7 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Casc4Q6P2L7 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Casc4Q6P2L7 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
Casc4Q6P2L7 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Casc4Q6P2L7 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
Casc4Q6P2L7 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Casc4Q6P2L7 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Casc4Q6P2L7 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Casc4Q6P2L7 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Casc4Q6P2L7 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Casc4Q6P2L7 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Casc4Q6P2L7 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Casc4Q6P2L7 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Casc4Q6P2L7 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Casc4Q6P2L7 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Casc4Q6P2L7 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC14.35□□□□□ -0.11
Casc4Q6P2L7 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Casc4Q6P2L7 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Casc4Q6P2L7 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Casc4Q6P2L7 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Casc4Q6P2L7 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Casc4Q6P2L7 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Casc4Q6P2L7 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Casc4Q6P2L7 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Casc4Q6P2L7 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Casc4Q6P2L7 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Casc4Q6P2L7 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Casc4Q6P2L7 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC14.35□□□□□ -0.11
Casc4Q6P2L7 Gm6222-201ENSMUST00000120787 396 ntBASIC14.35□□□□□ -0.11
Casc4Q6P2L7 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Casc4Q6P2L7 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Casc4Q6P2L7 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms