Protein–RNA interactions for Protein: Q5F4S9

Trpm3, Transient receptor potential cation channel, subfamily M, member 3, mousemouse

Predictions only

Length 1,721 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trpm3Q5F4S9 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
Trpm3Q5F4S9 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC17.64■□□□□ 0.41
Trpm3Q5F4S9 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trpm3Q5F4S9 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Trpm3Q5F4S9 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trpm3Q5F4S9 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Trpm3Q5F4S9 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Trpm3Q5F4S9 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Trpm3Q5F4S9 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Trpm3Q5F4S9 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trpm3Q5F4S9 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trpm3Q5F4S9 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Trpm3Q5F4S9 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Trpm3Q5F4S9 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Trpm3Q5F4S9 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC17.64■□□□□ 0.41
Trpm3Q5F4S9 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Trpm3Q5F4S9 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trpm3Q5F4S9 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Trpm3Q5F4S9 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trpm3Q5F4S9 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC17.64■□□□□ 0.41
Trpm3Q5F4S9 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC17.63■□□□□ 0.41
Trpm3Q5F4S9 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Trpm3Q5F4S9 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Trpm3Q5F4S9 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trpm3Q5F4S9 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Trpm3Q5F4S9 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trpm3Q5F4S9 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Trpm3Q5F4S9 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trpm3Q5F4S9 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC17.63■□□□□ 0.41
Trpm3Q5F4S9 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trpm3Q5F4S9 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Trpm3Q5F4S9 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Trpm3Q5F4S9 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
Trpm3Q5F4S9 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Trpm3Q5F4S9 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trpm3Q5F4S9 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Trpm3Q5F4S9 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Trpm3Q5F4S9 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Trpm3Q5F4S9 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC17.63■□□□□ 0.41
Trpm3Q5F4S9 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trpm3Q5F4S9 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Trpm3Q5F4S9 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Trpm3Q5F4S9 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trpm3Q5F4S9 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Trpm3Q5F4S9 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trpm3Q5F4S9 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trpm3Q5F4S9 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Trpm3Q5F4S9 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Trpm3Q5F4S9 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Trpm3Q5F4S9 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trpm3Q5F4S9 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Trpm3Q5F4S9 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Trpm3Q5F4S9 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Trpm3Q5F4S9 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Trpm3Q5F4S9 Gm7561-201ENSMUST00000211203 886 ntBASIC17.62■□□□□ 0.41
Trpm3Q5F4S9 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC17.62■□□□□ 0.41
Trpm3Q5F4S9 Gm3695-201ENSMUST00000087222 1009 ntBASIC17.62■□□□□ 0.41
Trpm3Q5F4S9 Gm6091-201ENSMUST00000098307 165 ntBASIC17.62■□□□□ 0.41
Trpm3Q5F4S9 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trpm3Q5F4S9 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trpm3Q5F4S9 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trpm3Q5F4S9 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Trpm3Q5F4S9 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trpm3Q5F4S9 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Trpm3Q5F4S9 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trpm3Q5F4S9 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trpm3Q5F4S9 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Trpm3Q5F4S9 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trpm3Q5F4S9 Gm8213-201ENSMUST00000118191 441 ntBASIC17.61■□□□□ 0.41
Trpm3Q5F4S9 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Trpm3Q5F4S9 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC17.61■□□□□ 0.41
Trpm3Q5F4S9 Gm18054-201ENSMUST00000207539 555 ntBASIC17.61■□□□□ 0.41
Trpm3Q5F4S9 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
Trpm3Q5F4S9 AC140451.2-201ENSMUST00000228030 664 ntBASIC17.61■□□□□ 0.41
Trpm3Q5F4S9 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Trpm3Q5F4S9 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Trpm3Q5F4S9 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Trpm3Q5F4S9 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trpm3Q5F4S9 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trpm3Q5F4S9 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trpm3Q5F4S9 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trpm3Q5F4S9 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trpm3Q5F4S9 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Trpm3Q5F4S9 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trpm3Q5F4S9 Gm10156-201ENSMUST00000122364 462 ntBASIC17.61■□□□□ 0.41
Trpm3Q5F4S9 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC17.61■□□□□ 0.41
Trpm3Q5F4S9 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC17.61■□□□□ 0.41
Trpm3Q5F4S9 Gm8810-201ENSMUST00000172895 754 ntBASIC17.61■□□□□ 0.41
Trpm3Q5F4S9 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC17.61■□□□□ 0.41
Trpm3Q5F4S9 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC17.61■□□□□ 0.41
Trpm3Q5F4S9 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trpm3Q5F4S9 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trpm3Q5F4S9 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trpm3Q5F4S9 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Trpm3Q5F4S9 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Trpm3Q5F4S9 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trpm3Q5F4S9 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Trpm3Q5F4S9 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trpm3Q5F4S9 AC167013.2-201ENSMUST00000228520 2684 ntBASIC17.6■□□□□ 0.41
Trpm3Q5F4S9 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC17.6■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms