Protein–RNA interactions for Protein: Q5DTM8

Rnf20, E3 ubiquitin-protein ligase BRE1A, mousemouse

Predictions only

Length 973 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf20Q5DTM8 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rnf20Q5DTM8 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rnf20Q5DTM8 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rnf20Q5DTM8 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Rnf20Q5DTM8 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rnf20Q5DTM8 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC16.88■□□□□ 0.29
Rnf20Q5DTM8 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC16.88■□□□□ 0.29
Rnf20Q5DTM8 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rnf20Q5DTM8 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Rnf20Q5DTM8 Gm27702-201ENSMUST00000184512 56 ntBASIC16.88■□□□□ 0.29
Rnf20Q5DTM8 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC16.88■□□□□ 0.29
Rnf20Q5DTM8 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Rnf20Q5DTM8 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Rnf20Q5DTM8 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rnf20Q5DTM8 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Rnf20Q5DTM8 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rnf20Q5DTM8 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rnf20Q5DTM8 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Rnf20Q5DTM8 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC16.88■□□□□ 0.29
Rnf20Q5DTM8 Mmp14-206ENSMUST00000225641 3238 ntBASIC16.87■□□□□ 0.29
Rnf20Q5DTM8 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rnf20Q5DTM8 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rnf20Q5DTM8 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rnf20Q5DTM8 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rnf20Q5DTM8 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rnf20Q5DTM8 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Rnf20Q5DTM8 BC001981-202ENSMUST00000191393 1545 ntBASIC16.87■□□□□ 0.29
Rnf20Q5DTM8 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Rnf20Q5DTM8 Gm26513-201ENSMUST00000181802 2489 ntBASIC16.87■□□□□ 0.29
Rnf20Q5DTM8 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rnf20Q5DTM8 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rnf20Q5DTM8 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rnf20Q5DTM8 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC16.87■□□□□ 0.29
Rnf20Q5DTM8 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC16.87■□□□□ 0.29
Rnf20Q5DTM8 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Rnf20Q5DTM8 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rnf20Q5DTM8 Gm45453-201ENSMUST00000211758 853 ntBASIC16.87■□□□□ 0.29
Rnf20Q5DTM8 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rnf20Q5DTM8 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rnf20Q5DTM8 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rnf20Q5DTM8 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC16.87■□□□□ 0.29
Rnf20Q5DTM8 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rnf20Q5DTM8 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rnf20Q5DTM8 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rnf20Q5DTM8 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rnf20Q5DTM8 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rnf20Q5DTM8 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rnf20Q5DTM8 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rnf20Q5DTM8 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC16.87■□□□□ 0.29
Rnf20Q5DTM8 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rnf20Q5DTM8 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
Rnf20Q5DTM8 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rnf20Q5DTM8 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rnf20Q5DTM8 Gm45751-201ENSMUST00000210185 1573 ntBASIC16.86■□□□□ 0.29
Rnf20Q5DTM8 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC16.86■□□□□ 0.29
Rnf20Q5DTM8 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rnf20Q5DTM8 Gm28182-201ENSMUST00000188354 2477 ntBASIC16.86■□□□□ 0.29
Rnf20Q5DTM8 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Rnf20Q5DTM8 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC16.86■□□□□ 0.29
Rnf20Q5DTM8 Gm18766-201ENSMUST00000189811 808 ntBASIC16.86■□□□□ 0.29
Rnf20Q5DTM8 Gm37935-201ENSMUST00000192012 982 ntBASIC16.86■□□□□ 0.29
Rnf20Q5DTM8 Gm10253-201ENSMUST00000194270 940 ntBASIC16.86■□□□□ 0.29
Rnf20Q5DTM8 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Rnf20Q5DTM8 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rnf20Q5DTM8 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rnf20Q5DTM8 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rnf20Q5DTM8 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rnf20Q5DTM8 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rnf20Q5DTM8 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rnf20Q5DTM8 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rnf20Q5DTM8 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rnf20Q5DTM8 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rnf20Q5DTM8 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Rnf20Q5DTM8 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rnf20Q5DTM8 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rnf20Q5DTM8 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rnf20Q5DTM8 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Rnf20Q5DTM8 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rnf20Q5DTM8 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rnf20Q5DTM8 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
Rnf20Q5DTM8 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC16.85■□□□□ 0.29
Rnf20Q5DTM8 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rnf20Q5DTM8 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rnf20Q5DTM8 AC166574.6-201ENSMUST00000227889 1806 ntBASIC16.85■□□□□ 0.29
Rnf20Q5DTM8 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Rnf20Q5DTM8 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC16.85■□□□□ 0.29
Rnf20Q5DTM8 Gm5566-201ENSMUST00000116118 459 ntBASIC16.85■□□□□ 0.29
Rnf20Q5DTM8 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC16.85■□□□□ 0.29
Rnf20Q5DTM8 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Rnf20Q5DTM8 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rnf20Q5DTM8 Gm27631-201ENSMUST00000184163 466 ntBASIC16.85■□□□□ 0.29
Rnf20Q5DTM8 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rnf20Q5DTM8 Gm5312-201ENSMUST00000203728 547 ntBASIC16.85■□□□□ 0.29
Rnf20Q5DTM8 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC16.85■□□□□ 0.29
Rnf20Q5DTM8 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC16.85■□□□□ 0.29
Rnf20Q5DTM8 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC16.85■□□□□ 0.29
Rnf20Q5DTM8 AC149588.3-201ENSMUST00000227515 150 ntBASIC16.85■□□□□ 0.29
Rnf20Q5DTM8 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC16.85■□□□□ 0.29
Rnf20Q5DTM8 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Rnf20Q5DTM8 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms