Protein–RNA interactions for Protein: Q571H0

Urb1, Nucleolar pre-ribosomal-associated protein 1, mousemouse

Known RBP Predictions only

Length 2,274 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Urb1Q571H0 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Urb1Q571H0 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Urb1Q571H0 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Urb1Q571H0 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Urb1Q571H0 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Urb1Q571H0 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC13.03□□□□□ -0.32
Urb1Q571H0 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
Urb1Q571H0 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Urb1Q571H0 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Urb1Q571H0 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Urb1Q571H0 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Urb1Q571H0 AC110817.1-201ENSMUST00000225706 605 ntBASIC13.03□□□□□ -0.32
Urb1Q571H0 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Urb1Q571H0 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Urb1Q571H0 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Urb1Q571H0 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Urb1Q571H0 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Urb1Q571H0 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Urb1Q571H0 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Urb1Q571H0 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC13.03□□□□□ -0.32
Urb1Q571H0 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Urb1Q571H0 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC13.03□□□□□ -0.32
Urb1Q571H0 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Urb1Q571H0 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Urb1Q571H0 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Urb1Q571H0 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Urb1Q571H0 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Urb1Q571H0 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Urb1Q571H0 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Urb1Q571H0 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Urb1Q571H0 Gm23931-201ENSMUST00000103842 109 ntBASIC13.02□□□□□ -0.32
Urb1Q571H0 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC13.02□□□□□ -0.32
Urb1Q571H0 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Urb1Q571H0 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC13.02□□□□□ -0.32
Urb1Q571H0 AC153872.1-201ENSMUST00000199539 128 ntBASIC13.02□□□□□ -0.32
Urb1Q571H0 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Urb1Q571H0 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC13.02□□□□□ -0.32
Urb1Q571H0 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Urb1Q571H0 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Urb1Q571H0 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Urb1Q571H0 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
Urb1Q571H0 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Urb1Q571H0 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Urb1Q571H0 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Urb1Q571H0 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Urb1Q571H0 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Urb1Q571H0 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Urb1Q571H0 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Urb1Q571H0 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Urb1Q571H0 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Urb1Q571H0 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Urb1Q571H0 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Urb1Q571H0 Gm15393-201ENSMUST00000120499 219 ntBASIC13.02□□□□□ -0.33
Urb1Q571H0 Olfr286-202ENSMUST00000205305 969 ntBASIC13.02□□□□□ -0.33
Urb1Q571H0 AC159896.2-201ENSMUST00000214753 269 ntBASIC13.02□□□□□ -0.33
Urb1Q571H0 AC154319.1-201ENSMUST00000216330 312 ntBASIC13.02□□□□□ -0.33
Urb1Q571H0 AC156560.2-201ENSMUST00000221232 264 ntBASIC13.02□□□□□ -0.33
Urb1Q571H0 AL589735.1-201ENSMUST00000224353 270 ntBASIC13.02□□□□□ -0.33
Urb1Q571H0 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC13.02□□□□□ -0.33
Urb1Q571H0 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Urb1Q571H0 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Urb1Q571H0 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Urb1Q571H0 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Urb1Q571H0 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Urb1Q571H0 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Urb1Q571H0 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Urb1Q571H0 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Urb1Q571H0 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Urb1Q571H0 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Urb1Q571H0 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Urb1Q571H0 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC13.01□□□□□ -0.33
Urb1Q571H0 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Urb1Q571H0 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Urb1Q571H0 Gm14723-201ENSMUST00000118686 215 ntBASIC13.01□□□□□ -0.33
Urb1Q571H0 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Urb1Q571H0 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Urb1Q571H0 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Urb1Q571H0 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Urb1Q571H0 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Urb1Q571H0 Gm11661-201ENSMUST00000121761 1327 ntBASIC13.01□□□□□ -0.33
Urb1Q571H0 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC13.01□□□□□ -0.33
Urb1Q571H0 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Urb1Q571H0 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC13.01□□□□□ -0.33
Urb1Q571H0 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Urb1Q571H0 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC13.01□□□□□ -0.33
Urb1Q571H0 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Urb1Q571H0 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Urb1Q571H0 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Urb1Q571H0 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Urb1Q571H0 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
Urb1Q571H0 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Urb1Q571H0 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Urb1Q571H0 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Urb1Q571H0 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC13.01□□□□□ -0.33
Urb1Q571H0 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Urb1Q571H0 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC13.01□□□□□ -0.33
Urb1Q571H0 Gm17795-201ENSMUST00000214505 757 ntBASIC13.01□□□□□ -0.33
Urb1Q571H0 AC154171.1-201ENSMUST00000224610 643 ntBASIC13.01□□□□□ -0.33
Urb1Q571H0 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Urb1Q571H0 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC13.01□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 48.3 ms