Protein–RNA interactions for Protein: Q56A07

Scn2b, Sodium channel subunit beta-2, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn2bQ56A07 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Scn2bQ56A07 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Scn2bQ56A07 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Scn2bQ56A07 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Scn2bQ56A07 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Scn2bQ56A07 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
Scn2bQ56A07 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Scn2bQ56A07 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Scn2bQ56A07 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Scn2bQ56A07 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Scn2bQ56A07 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC14.01□□□□□ -0.17
Scn2bQ56A07 Rpph1-201ENSMUST00000175096 319 ntBASIC14.01□□□□□ -0.17
Scn2bQ56A07 Gm37019-201ENSMUST00000192133 2134 ntBASIC14.01□□□□□ -0.17
Scn2bQ56A07 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC14.01□□□□□ -0.17
Scn2bQ56A07 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Scn2bQ56A07 Gm20553-201ENSMUST00000204205 844 ntBASIC14.01□□□□□ -0.17
Scn2bQ56A07 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Scn2bQ56A07 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Scn2bQ56A07 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Scn2bQ56A07 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Scn2bQ56A07 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC14.01□□□□□ -0.17
Scn2bQ56A07 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Scn2bQ56A07 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC14.01□□□□□ -0.17
Scn2bQ56A07 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Scn2bQ56A07 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Scn2bQ56A07 Nrn1-204ENSMUST00000224323 1779 ntBASIC14.01□□□□□ -0.17
Scn2bQ56A07 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Scn2bQ56A07 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Scn2bQ56A07 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Scn2bQ56A07 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Scn2bQ56A07 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Scn2bQ56A07 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Scn2bQ56A07 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Scn2bQ56A07 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Scn2bQ56A07 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC14□□□□□ -0.17
Scn2bQ56A07 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Scn2bQ56A07 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC14□□□□□ -0.17
Scn2bQ56A07 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Scn2bQ56A07 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Scn2bQ56A07 AC121801.1-201ENSMUST00000225363 1899 ntBASIC14□□□□□ -0.17
Scn2bQ56A07 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Scn2bQ56A07 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Scn2bQ56A07 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Scn2bQ56A07 Mir1895-201ENSMUST00000122615 79 ntBASIC14□□□□□ -0.17
Scn2bQ56A07 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC14□□□□□ -0.17
Scn2bQ56A07 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC14□□□□□ -0.17
Scn2bQ56A07 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC14□□□□□ -0.17
Scn2bQ56A07 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Scn2bQ56A07 Gm43575-201ENSMUST00000196420 516 ntBASIC14□□□□□ -0.17
Scn2bQ56A07 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC14□□□□□ -0.17
Scn2bQ56A07 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC14□□□□□ -0.17
Scn2bQ56A07 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC14□□□□□ -0.17
Scn2bQ56A07 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Scn2bQ56A07 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC14□□□□□ -0.17
Scn2bQ56A07 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC14□□□□□ -0.17
Scn2bQ56A07 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC14□□□□□ -0.17
Scn2bQ56A07 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC14□□□□□ -0.17
Scn2bQ56A07 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Scn2bQ56A07 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Scn2bQ56A07 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC14□□□□□ -0.17
Scn2bQ56A07 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Scn2bQ56A07 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Scn2bQ56A07 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Scn2bQ56A07 AC115735.4-201ENSMUST00000227460 1944 ntBASIC14□□□□□ -0.17
Scn2bQ56A07 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Scn2bQ56A07 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC13.99□□□□□ -0.17
Scn2bQ56A07 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Scn2bQ56A07 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC13.99□□□□□ -0.17
Scn2bQ56A07 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Scn2bQ56A07 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Scn2bQ56A07 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Scn2bQ56A07 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Scn2bQ56A07 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Scn2bQ56A07 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Scn2bQ56A07 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Scn2bQ56A07 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Scn2bQ56A07 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Scn2bQ56A07 Gm42769-201ENSMUST00000198576 1659 ntBASIC13.99□□□□□ -0.17
Scn2bQ56A07 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Scn2bQ56A07 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Scn2bQ56A07 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC13.99□□□□□ -0.17
Scn2bQ56A07 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC13.99□□□□□ -0.17
Scn2bQ56A07 Gm27494-201ENSMUST00000184735 189 ntBASIC13.99□□□□□ -0.17
Scn2bQ56A07 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Scn2bQ56A07 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Scn2bQ56A07 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Scn2bQ56A07 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Scn2bQ56A07 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Scn2bQ56A07 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC13.99□□□□□ -0.17
Scn2bQ56A07 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Scn2bQ56A07 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Scn2bQ56A07 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Scn2bQ56A07 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Scn2bQ56A07 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Scn2bQ56A07 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Scn2bQ56A07 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC13.99□□□□□ -0.17
Scn2bQ56A07 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Scn2bQ56A07 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Scn2bQ56A07 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Scn2bQ56A07 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 55.8 ms