Protein–RNA interactions for Protein: Q4FZF3

Ddx49, Probable ATP-dependent RNA helicase DDX49, mousemouse

Known RBP Predictions only

Length 480 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx49Q4FZF3 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ddx49Q4FZF3 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ddx49Q4FZF3 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ddx49Q4FZF3 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Ddx49Q4FZF3 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ddx49Q4FZF3 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC16.45■□□□□ 0.22
Ddx49Q4FZF3 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
Ddx49Q4FZF3 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ddx49Q4FZF3 Gm6283-201ENSMUST00000182369 1000 ntBASIC16.45■□□□□ 0.22
Ddx49Q4FZF3 Gm42693-201ENSMUST00000196779 631 ntBASIC16.45■□□□□ 0.22
Ddx49Q4FZF3 AC155258.1-201ENSMUST00000219303 253 ntBASIC16.45■□□□□ 0.22
Ddx49Q4FZF3 AC140451.2-201ENSMUST00000228030 664 ntBASIC16.45■□□□□ 0.22
Ddx49Q4FZF3 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ddx49Q4FZF3 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ddx49Q4FZF3 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ddx49Q4FZF3 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC16.45■□□□□ 0.22
Ddx49Q4FZF3 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC16.45■□□□□ 0.22
Ddx49Q4FZF3 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Ddx49Q4FZF3 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ddx49Q4FZF3 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ddx49Q4FZF3 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ddx49Q4FZF3 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ddx49Q4FZF3 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ddx49Q4FZF3 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ddx49Q4FZF3 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Ddx49Q4FZF3 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Ddx49Q4FZF3 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ddx49Q4FZF3 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC16.45■□□□□ 0.22
Ddx49Q4FZF3 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ddx49Q4FZF3 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC16.44■□□□□ 0.22
Ddx49Q4FZF3 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Ddx49Q4FZF3 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ddx49Q4FZF3 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ddx49Q4FZF3 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ddx49Q4FZF3 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ddx49Q4FZF3 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC16.44■□□□□ 0.22
Ddx49Q4FZF3 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ddx49Q4FZF3 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ddx49Q4FZF3 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ddx49Q4FZF3 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC16.44■□□□□ 0.22
Ddx49Q4FZF3 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ddx49Q4FZF3 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ddx49Q4FZF3 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ddx49Q4FZF3 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Ddx49Q4FZF3 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ddx49Q4FZF3 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ddx49Q4FZF3 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Ddx49Q4FZF3 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC16.44■□□□□ 0.22
Ddx49Q4FZF3 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
Ddx49Q4FZF3 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ddx49Q4FZF3 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC16.44■□□□□ 0.22
Ddx49Q4FZF3 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC16.44■□□□□ 0.22
Ddx49Q4FZF3 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC16.44■□□□□ 0.22
Ddx49Q4FZF3 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ddx49Q4FZF3 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Ddx49Q4FZF3 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ddx49Q4FZF3 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ddx49Q4FZF3 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Ddx49Q4FZF3 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ddx49Q4FZF3 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC16.44■□□□□ 0.22
Ddx49Q4FZF3 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ddx49Q4FZF3 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Ddx49Q4FZF3 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC16.44■□□□□ 0.22
Ddx49Q4FZF3 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Ddx49Q4FZF3 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Ddx49Q4FZF3 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ddx49Q4FZF3 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ddx49Q4FZF3 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Ddx49Q4FZF3 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ddx49Q4FZF3 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ddx49Q4FZF3 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ddx49Q4FZF3 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Ddx49Q4FZF3 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ddx49Q4FZF3 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ddx49Q4FZF3 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ddx49Q4FZF3 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ddx49Q4FZF3 AC159649.2-201ENSMUST00000222984 3223 ntBASIC16.43■□□□□ 0.22
Ddx49Q4FZF3 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ddx49Q4FZF3 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Ddx49Q4FZF3 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Ddx49Q4FZF3 Gm27486-201ENSMUST00000184923 80 ntBASIC16.43■□□□□ 0.22
Ddx49Q4FZF3 Gm45784-201ENSMUST00000188360 142 ntBASIC16.43■□□□□ 0.22
Ddx49Q4FZF3 Gm2495-201ENSMUST00000191160 466 ntBASIC16.43■□□□□ 0.22
Ddx49Q4FZF3 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC16.43■□□□□ 0.22
Ddx49Q4FZF3 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ddx49Q4FZF3 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ddx49Q4FZF3 Gm10478-201ENSMUST00000084451 396 ntBASIC16.43■□□□□ 0.22
Ddx49Q4FZF3 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ddx49Q4FZF3 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ddx49Q4FZF3 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ddx49Q4FZF3 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Ddx49Q4FZF3 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ddx49Q4FZF3 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Ddx49Q4FZF3 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Ddx49Q4FZF3 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ddx49Q4FZF3 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ddx49Q4FZF3 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ddx49Q4FZF3 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ddx49Q4FZF3 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ddx49Q4FZF3 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC16.43■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms