Protein–RNA interactions for Protein: Q4FK66

Prpf38a, Pre-mRNA-splicing factor 38A, mousemouse

Known RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38aQ4FK66 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Prpf38aQ4FK66 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Prpf38aQ4FK66 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Prpf38aQ4FK66 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Prpf38aQ4FK66 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Prpf38aQ4FK66 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Prpf38aQ4FK66 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC16.51■□□□□ 0.23
Prpf38aQ4FK66 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Prpf38aQ4FK66 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Prpf38aQ4FK66 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Prpf38aQ4FK66 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Prpf38aQ4FK66 AC121801.1-201ENSMUST00000225363 1899 ntBASIC16.5■□□□□ 0.23
Prpf38aQ4FK66 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Prpf38aQ4FK66 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Prpf38aQ4FK66 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Prpf38aQ4FK66 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Prpf38aQ4FK66 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Prpf38aQ4FK66 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Prpf38aQ4FK66 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Prpf38aQ4FK66 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Prpf38aQ4FK66 Gm44443-201ENSMUST00000204396 5633 ntBASIC16.5■□□□□ 0.23
Prpf38aQ4FK66 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Prpf38aQ4FK66 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Prpf38aQ4FK66 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Prpf38aQ4FK66 Gm12091-201ENSMUST00000146791 830 ntBASIC16.5■□□□□ 0.23
Prpf38aQ4FK66 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC16.5■□□□□ 0.23
Prpf38aQ4FK66 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Prpf38aQ4FK66 Gm5279-201ENSMUST00000199575 745 ntBASIC16.5■□□□□ 0.23
Prpf38aQ4FK66 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Prpf38aQ4FK66 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Prpf38aQ4FK66 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Prpf38aQ4FK66 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Prpf38aQ4FK66 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Prpf38aQ4FK66 AC115735.4-201ENSMUST00000227460 1944 ntBASIC16.5■□□□□ 0.23
Prpf38aQ4FK66 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Prpf38aQ4FK66 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Prpf38aQ4FK66 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Prpf38aQ4FK66 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Prpf38aQ4FK66 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Prpf38aQ4FK66 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Prpf38aQ4FK66 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC16.49■□□□□ 0.23
Prpf38aQ4FK66 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Prpf38aQ4FK66 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Prpf38aQ4FK66 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Prpf38aQ4FK66 Gm9115-201ENSMUST00000120192 1348 ntBASIC16.49■□□□□ 0.23
Prpf38aQ4FK66 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Prpf38aQ4FK66 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Prpf38aQ4FK66 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC16.49■□□□□ 0.23
Prpf38aQ4FK66 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Prpf38aQ4FK66 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Prpf38aQ4FK66 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Prpf38aQ4FK66 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC16.49■□□□□ 0.23
Prpf38aQ4FK66 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC16.49■□□□□ 0.23
Prpf38aQ4FK66 Gm9908-201ENSMUST00000211534 448 ntBASIC16.49■□□□□ 0.23
Prpf38aQ4FK66 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Prpf38aQ4FK66 AC114543.1-201ENSMUST00000226451 1558 ntBASIC16.49■□□□□ 0.23
Prpf38aQ4FK66 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC16.49■□□□□ 0.23
Prpf38aQ4FK66 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Prpf38aQ4FK66 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Prpf38aQ4FK66 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Prpf38aQ4FK66 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC16.49■□□□□ 0.23
Prpf38aQ4FK66 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Prpf38aQ4FK66 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC16.49■□□□□ 0.23
Prpf38aQ4FK66 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Prpf38aQ4FK66 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Prpf38aQ4FK66 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Prpf38aQ4FK66 Ap5m1-205ENSMUST00000227431 3757 ntBASIC16.49■□□□□ 0.23
Prpf38aQ4FK66 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC16.49■□□□□ 0.23
Prpf38aQ4FK66 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Prpf38aQ4FK66 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Prpf38aQ4FK66 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Prpf38aQ4FK66 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Prpf38aQ4FK66 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Prpf38aQ4FK66 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Prpf38aQ4FK66 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC16.48■□□□□ 0.23
Prpf38aQ4FK66 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Prpf38aQ4FK66 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Prpf38aQ4FK66 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Prpf38aQ4FK66 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Prpf38aQ4FK66 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC16.48■□□□□ 0.23
Prpf38aQ4FK66 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC16.48■□□□□ 0.23
Prpf38aQ4FK66 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC16.48■□□□□ 0.23
Prpf38aQ4FK66 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Prpf38aQ4FK66 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Prpf38aQ4FK66 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Prpf38aQ4FK66 Gm6912-201ENSMUST00000117218 544 ntBASIC16.48■□□□□ 0.23
Prpf38aQ4FK66 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Prpf38aQ4FK66 AC155286.1-201ENSMUST00000218632 448 ntBASIC16.48■□□□□ 0.23
Prpf38aQ4FK66 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Prpf38aQ4FK66 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC16.48■□□□□ 0.23
Prpf38aQ4FK66 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Prpf38aQ4FK66 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Prpf38aQ4FK66 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Prpf38aQ4FK66 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Prpf38aQ4FK66 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Prpf38aQ4FK66 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Prpf38aQ4FK66 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Prpf38aQ4FK66 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Prpf38aQ4FK66 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC16.48■□□□□ 0.23
Prpf38aQ4FK66 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms