Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Spg11Q3UHA3 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Spg11Q3UHA3 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Spg11Q3UHA3 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Spg11Q3UHA3 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
Spg11Q3UHA3 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Spg11Q3UHA3 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Spg11Q3UHA3 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Spg11Q3UHA3 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Spg11Q3UHA3 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC12.91□□□□□ -0.34
Spg11Q3UHA3 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC12.91□□□□□ -0.34
Spg11Q3UHA3 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Spg11Q3UHA3 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Spg11Q3UHA3 Gm13385-201ENSMUST00000121089 220 ntBASIC12.91□□□□□ -0.34
Spg11Q3UHA3 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC12.91□□□□□ -0.34
Spg11Q3UHA3 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Spg11Q3UHA3 Gm24420-201ENSMUST00000176676 59 ntBASIC12.91□□□□□ -0.34
Spg11Q3UHA3 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Spg11Q3UHA3 Gm37922-201ENSMUST00000195596 455 ntBASIC12.91□□□□□ -0.34
Spg11Q3UHA3 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC12.91□□□□□ -0.34
Spg11Q3UHA3 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC12.91□□□□□ -0.34
Spg11Q3UHA3 Cotl1-203ENSMUST00000211873 826 ntTSL 5 BASIC12.91□□□□□ -0.34
Spg11Q3UHA3 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Spg11Q3UHA3 Defb36-201ENSMUST00000058086 468 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Spg11Q3UHA3 Ufc1-201ENSMUST00000080001 1007 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Spg11Q3UHA3 Lce1e-201ENSMUST00000090867 711 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Spg11Q3UHA3 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Spg11Q3UHA3 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Spg11Q3UHA3 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Spg11Q3UHA3 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Spg11Q3UHA3 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Spg11Q3UHA3 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC12.91□□□□□ -0.34
Spg11Q3UHA3 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Spg11Q3UHA3 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Spg11Q3UHA3 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Spg11Q3UHA3 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Spg11Q3UHA3 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Spg11Q3UHA3 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC12.9□□□□□ -0.34
Spg11Q3UHA3 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Spg11Q3UHA3 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Spg11Q3UHA3 Gm42901-201ENSMUST00000197735 3171 ntBASIC12.9□□□□□ -0.34
Spg11Q3UHA3 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.34
Spg11Q3UHA3 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Spg11Q3UHA3 Gm5778-201ENSMUST00000171003 1072 ntBASIC12.9□□□□□ -0.34
Spg11Q3UHA3 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Spg11Q3UHA3 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Spg11Q3UHA3 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Spg11Q3UHA3 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Spg11Q3UHA3 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Spg11Q3UHA3 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Spg11Q3UHA3 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Spg11Q3UHA3 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Spg11Q3UHA3 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Spg11Q3UHA3 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Spg11Q3UHA3 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Spg11Q3UHA3 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC12.9□□□□□ -0.34
Spg11Q3UHA3 Mrpl23-206ENSMUST00000210662 736 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Spg11Q3UHA3 Gm45684-201ENSMUST00000210244 1571 ntBASIC12.9□□□□□ -0.34
Spg11Q3UHA3 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
Spg11Q3UHA3 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Spg11Q3UHA3 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Spg11Q3UHA3 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Spg11Q3UHA3 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Spg11Q3UHA3 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Spg11Q3UHA3 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Spg11Q3UHA3 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Spg11Q3UHA3 Prdx1-202ENSMUST00000106470 877 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Spg11Q3UHA3 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC12.89□□□□□ -0.35
Spg11Q3UHA3 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC12.89□□□□□ -0.35
Spg11Q3UHA3 Gm27175-201ENSMUST00000183759 606 ntTSL 3 BASIC12.89□□□□□ -0.35
Spg11Q3UHA3 Gm27223-201ENSMUST00000184653 606 ntTSL 3 BASIC12.89□□□□□ -0.35
Spg11Q3UHA3 Gm29087-201ENSMUST00000186462 645 ntTSL 5 BASIC12.89□□□□□ -0.35
Spg11Q3UHA3 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Spg11Q3UHA3 Gm18615-201ENSMUST00000222919 1031 ntBASIC12.89□□□□□ -0.35
Spg11Q3UHA3 Tex30-201ENSMUST00000027215 1272 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Spg11Q3UHA3 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Spg11Q3UHA3 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Spg11Q3UHA3 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Spg11Q3UHA3 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC12.89□□□□□ -0.35
Spg11Q3UHA3 Gm43352-201ENSMUST00000196419 3065 ntBASIC12.89□□□□□ -0.35
Spg11Q3UHA3 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Spg11Q3UHA3 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Spg11Q3UHA3 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Spg11Q3UHA3 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Spg11Q3UHA3 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Spg11Q3UHA3 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Spg11Q3UHA3 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Spg11Q3UHA3 Rad54b-203ENSMUST00000108306 652 ntTSL 3 BASIC12.89□□□□□ -0.35
Spg11Q3UHA3 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC12.89□□□□□ -0.35
Spg11Q3UHA3 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC12.89□□□□□ -0.35
Spg11Q3UHA3 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Spg11Q3UHA3 Gm9678-201ENSMUST00000198979 1149 ntBASIC12.89□□□□□ -0.35
Spg11Q3UHA3 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Spg11Q3UHA3 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC12.89□□□□□ -0.35
Spg11Q3UHA3 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Spg11Q3UHA3 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC12.89□□□□□ -0.35
Spg11Q3UHA3 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Spg11Q3UHA3 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Spg11Q3UHA3 Ntrk2-205ENSMUST00000224402 2284 ntBASIC12.89□□□□□ -0.35
Spg11Q3UHA3 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms