Protein–RNA interactions for Protein: Q05895

Thbs3, Thrombospondin-3, mousemouse

Predictions only

Length 956 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thbs3Q05895 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC12.46□□□□□ -0.42
Thbs3Q05895 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Thbs3Q05895 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Thbs3Q05895 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Thbs3Q05895 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Thbs3Q05895 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Thbs3Q05895 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Thbs3Q05895 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Thbs3Q05895 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Thbs3Q05895 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Thbs3Q05895 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Thbs3Q05895 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Thbs3Q05895 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC12.45□□□□□ -0.42
Thbs3Q05895 AC154767.3-201ENSMUST00000225150 1342 ntBASIC12.45□□□□□ -0.42
Thbs3Q05895 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Thbs3Q05895 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Thbs3Q05895 Sorbs3-204ENSMUST00000227929 2460 ntBASIC12.45□□□□□ -0.42
Thbs3Q05895 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Thbs3Q05895 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Thbs3Q05895 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC12.45□□□□□ -0.42
Thbs3Q05895 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Thbs3Q05895 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Thbs3Q05895 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Thbs3Q05895 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Thbs3Q05895 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Thbs3Q05895 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC12.45□□□□□ -0.42
Thbs3Q05895 Gm16476-201ENSMUST00000221544 139 ntBASIC12.45□□□□□ -0.42
Thbs3Q05895 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Thbs3Q05895 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Thbs3Q05895 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Thbs3Q05895 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Thbs3Q05895 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Thbs3Q05895 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC12.45□□□□□ -0.42
Thbs3Q05895 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Thbs3Q05895 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Thbs3Q05895 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Thbs3Q05895 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Thbs3Q05895 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Thbs3Q05895 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Thbs3Q05895 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Thbs3Q05895 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Thbs3Q05895 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Thbs3Q05895 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC12.45□□□□□ -0.42
Thbs3Q05895 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC12.45□□□□□ -0.42
Thbs3Q05895 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC12.45□□□□□ -0.42
Thbs3Q05895 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Thbs3Q05895 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC12.45□□□□□ -0.42
Thbs3Q05895 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Thbs3Q05895 Nupl1-207ENSMUST00000225311 2475 ntBASIC12.45□□□□□ -0.42
Thbs3Q05895 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Thbs3Q05895 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Thbs3Q05895 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
Thbs3Q05895 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Thbs3Q05895 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Thbs3Q05895 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Thbs3Q05895 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Thbs3Q05895 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Thbs3Q05895 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC12.44□□□□□ -0.42
Thbs3Q05895 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
Thbs3Q05895 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC12.44□□□□□ -0.42
Thbs3Q05895 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Thbs3Q05895 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Thbs3Q05895 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Thbs3Q05895 Gm22175-201ENSMUST00000175007 78 ntBASIC12.44□□□□□ -0.42
Thbs3Q05895 Gm27622-201ENSMUST00000183779 60 ntBASIC12.44□□□□□ -0.42
Thbs3Q05895 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
Thbs3Q05895 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Thbs3Q05895 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Thbs3Q05895 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Thbs3Q05895 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Thbs3Q05895 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC12.44□□□□□ -0.42
Thbs3Q05895 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Thbs3Q05895 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Thbs3Q05895 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC12.44□□□□□ -0.42
Thbs3Q05895 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Thbs3Q05895 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Thbs3Q05895 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Thbs3Q05895 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Thbs3Q05895 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Thbs3Q05895 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Thbs3Q05895 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC12.44□□□□□ -0.42
Thbs3Q05895 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Thbs3Q05895 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Thbs3Q05895 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Thbs3Q05895 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Thbs3Q05895 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Thbs3Q05895 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Thbs3Q05895 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC12.43□□□□□ -0.42
Thbs3Q05895 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Thbs3Q05895 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Thbs3Q05895 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Thbs3Q05895 Gm38102-201ENSMUST00000192791 1935 ntBASIC12.43□□□□□ -0.42
Thbs3Q05895 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Thbs3Q05895 AC121801.1-201ENSMUST00000225363 1899 ntBASIC12.43□□□□□ -0.42
Thbs3Q05895 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Thbs3Q05895 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Thbs3Q05895 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Thbs3Q05895 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Thbs3Q05895 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Thbs3Q05895 Gm15653-201ENSMUST00000119247 907 ntBASIC12.43□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 47.6 ms