Protein–RNA interactions for Protein: Q05793

Hspg2, Basement membrane-specific heparan sulfate proteoglycan core protein, mousemouse

Known RBP Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hspg2Q05793 Gm2606-201ENSMUST00000100754 1002 ntBASIC10.19□□□□□ -0.78
Hspg2Q05793 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC10.19□□□□□ -0.78
Hspg2Q05793 Gm12537-201ENSMUST00000119266 1002 ntBASIC10.19□□□□□ -0.78
Hspg2Q05793 Gm12070-201ENSMUST00000119551 1002 ntBASIC10.19□□□□□ -0.78
Hspg2Q05793 Gm12671-201ENSMUST00000119978 1002 ntBASIC10.19□□□□□ -0.78
Hspg2Q05793 Gm13292-201ENSMUST00000120014 1000 ntBASIC10.19□□□□□ -0.78
Hspg2Q05793 Gm5637-201ENSMUST00000153890 1119 ntBASIC10.19□□□□□ -0.78
Hspg2Q05793 Gm4271-201ENSMUST00000174444 973 ntBASIC10.19□□□□□ -0.78
Hspg2Q05793 Gm10359-201ENSMUST00000180167 1002 ntBASIC10.19□□□□□ -0.78
Hspg2Q05793 Gm12033-201ENSMUST00000180654 1002 ntBASIC10.19□□□□□ -0.78
Hspg2Q05793 Gm5559-201ENSMUST00000180755 1002 ntBASIC10.19□□□□□ -0.78
Hspg2Q05793 Gm42817-201ENSMUST00000198962 607 ntTSL 3 BASIC10.19□□□□□ -0.78
Hspg2Q05793 Gm21769-201ENSMUST00000211922 111 ntBASIC10.19□□□□□ -0.78
Hspg2Q05793 Gm7293-201ENSMUST00000216682 1007 ntBASIC10.19□□□□□ -0.78
Hspg2Q05793 Gm18027-201ENSMUST00000218947 619 ntBASIC10.19□□□□□ -0.78
Hspg2Q05793 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Hspg2Q05793 Gm12500-202ENSMUST00000186471 2428 ntBASIC10.18□□□□□ -0.78
Hspg2Q05793 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Hspg2Q05793 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC10.18□□□□□ -0.78
Hspg2Q05793 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Hspg2Q05793 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC10.18□□□□□ -0.78
Hspg2Q05793 Gm25261-201ENSMUST00000157416 134 ntBASIC10.18□□□□□ -0.78
Hspg2Q05793 Gm2383-201ENSMUST00000181461 807 ntBASIC10.18□□□□□ -0.78
Hspg2Q05793 D9Wsu149-201ENSMUST00000214169 594 ntBASIC10.18□□□□□ -0.78
Hspg2Q05793 AC132384.14-201ENSMUST00000219346 1147 ntBASIC10.18□□□□□ -0.78
Hspg2Q05793 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC10.18□□□□□ -0.78
Hspg2Q05793 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Hspg2Q05793 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Hspg2Q05793 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Hspg2Q05793 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Hspg2Q05793 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Hspg2Q05793 Tyms-ps-201ENSMUST00000219550 915 ntBASIC10.18□□□□□ -0.78
Hspg2Q05793 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Hspg2Q05793 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Hspg2Q05793 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Hspg2Q05793 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Hspg2Q05793 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Hspg2Q05793 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC10.18□□□□□ -0.78
Hspg2Q05793 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Hspg2Q05793 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Hspg2Q05793 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Hspg2Q05793 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Hspg2Q05793 Mir686-201ENSMUST00000102174 109 ntBASIC10.18□□□□□ -0.78
Hspg2Q05793 Gm16342-201ENSMUST00000124025 1025 ntBASIC10.18□□□□□ -0.78
Hspg2Q05793 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Hspg2Q05793 Gm25732-201ENSMUST00000175168 60 ntBASIC10.18□□□□□ -0.78
Hspg2Q05793 Gm8285-201ENSMUST00000208293 759 ntBASIC10.18□□□□□ -0.78
Hspg2Q05793 AC166997.1-201ENSMUST00000225122 572 ntBASIC10.18□□□□□ -0.78
Hspg2Q05793 Tmem210-201ENSMUST00000028340 516 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Hspg2Q05793 n-R5s195-201ENSMUST00000082891 119 ntBASIC10.18□□□□□ -0.78
Hspg2Q05793 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Hspg2Q05793 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Hspg2Q05793 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC10.18□□□□□ -0.78
Hspg2Q05793 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC10.17□□□□□ -0.78
Hspg2Q05793 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Hspg2Q05793 Selenot-ps-201ENSMUST00000119098 593 ntBASIC10.17□□□□□ -0.78
Hspg2Q05793 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Hspg2Q05793 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC10.17□□□□□ -0.78
Hspg2Q05793 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
Hspg2Q05793 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC10.17□□□□□ -0.78
Hspg2Q05793 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC10.17□□□□□ -0.78
Hspg2Q05793 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Hspg2Q05793 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Hspg2Q05793 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC10.17□□□□□ -0.78
Hspg2Q05793 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Hspg2Q05793 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
Hspg2Q05793 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Hspg2Q05793 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC10.17□□□□□ -0.78
Hspg2Q05793 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC10.17□□□□□ -0.78
Hspg2Q05793 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC10.17□□□□□ -0.78
Hspg2Q05793 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC10.17□□□□□ -0.78
Hspg2Q05793 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC10.17□□□□□ -0.78
Hspg2Q05793 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC10.17□□□□□ -0.78
Hspg2Q05793 Cd27-203ENSMUST00000112282 588 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Hspg2Q05793 Gm14381-201ENSMUST00000122105 414 ntBASIC10.17□□□□□ -0.78
Hspg2Q05793 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC10.17□□□□□ -0.78
Hspg2Q05793 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC10.17□□□□□ -0.78
Hspg2Q05793 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Hspg2Q05793 Gm8099-201ENSMUST00000200510 742 ntBASIC10.17□□□□□ -0.78
Hspg2Q05793 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC10.17□□□□□ -0.78
Hspg2Q05793 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Hspg2Q05793 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
Hspg2Q05793 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Hspg2Q05793 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
Hspg2Q05793 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Hspg2Q05793 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Hspg2Q05793 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Hspg2Q05793 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Hspg2Q05793 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Hspg2Q05793 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
Hspg2Q05793 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
Hspg2Q05793 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Hspg2Q05793 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Hspg2Q05793 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Hspg2Q05793 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC10.17□□□□□ -0.78
Hspg2Q05793 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Hspg2Q05793 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC10.16□□□□□ -0.78
Hspg2Q05793 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
Hspg2Q05793 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
Hspg2Q05793 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms