Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Col8a1Q00780 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Col8a1Q00780 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Col8a1Q00780 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Col8a1Q00780 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Col8a1Q00780 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Col8a1Q00780 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Col8a1Q00780 Celf4-206ENSMUST00000224553 1729 ntBASIC12.06□□□□□ -0.48
Col8a1Q00780 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
Col8a1Q00780 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Col8a1Q00780 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Col8a1Q00780 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Col8a1Q00780 Gm8242-201ENSMUST00000193029 1420 ntBASIC12.06□□□□□ -0.48
Col8a1Q00780 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Col8a1Q00780 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Col8a1Q00780 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC12.06□□□□□ -0.48
Col8a1Q00780 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Col8a1Q00780 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Col8a1Q00780 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Col8a1Q00780 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
Col8a1Q00780 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Col8a1Q00780 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Col8a1Q00780 Gm8652-201ENSMUST00000181363 964 ntBASIC12.06□□□□□ -0.48
Col8a1Q00780 Gm6944-201ENSMUST00000182449 1006 ntBASIC12.06□□□□□ -0.48
Col8a1Q00780 Gm5279-201ENSMUST00000199575 745 ntBASIC12.06□□□□□ -0.48
Col8a1Q00780 Gm9299-201ENSMUST00000206392 1140 ntBASIC12.06□□□□□ -0.48
Col8a1Q00780 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Col8a1Q00780 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC12.06□□□□□ -0.48
Col8a1Q00780 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Col8a1Q00780 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Col8a1Q00780 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Col8a1Q00780 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Col8a1Q00780 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Col8a1Q00780 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Col8a1Q00780 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Col8a1Q00780 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Col8a1Q00780 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC12.06□□□□□ -0.48
Col8a1Q00780 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Col8a1Q00780 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Col8a1Q00780 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Col8a1Q00780 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Col8a1Q00780 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Col8a1Q00780 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Col8a1Q00780 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Col8a1Q00780 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Col8a1Q00780 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Col8a1Q00780 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Col8a1Q00780 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Col8a1Q00780 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Col8a1Q00780 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Col8a1Q00780 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC12.06□□□□□ -0.48
Col8a1Q00780 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Col8a1Q00780 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Col8a1Q00780 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Col8a1Q00780 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Col8a1Q00780 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Col8a1Q00780 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC12.05□□□□□ -0.48
Col8a1Q00780 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Col8a1Q00780 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Col8a1Q00780 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Col8a1Q00780 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Col8a1Q00780 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC12.05□□□□□ -0.48
Col8a1Q00780 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Col8a1Q00780 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Col8a1Q00780 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Col8a1Q00780 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Col8a1Q00780 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC12.05□□□□□ -0.48
Col8a1Q00780 Gm5940-201ENSMUST00000117582 1068 ntBASIC12.05□□□□□ -0.48
Col8a1Q00780 Gm13464-201ENSMUST00000119418 935 ntBASIC12.05□□□□□ -0.48
Col8a1Q00780 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC12.05□□□□□ -0.48
Col8a1Q00780 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Col8a1Q00780 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC12.05□□□□□ -0.48
Col8a1Q00780 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC12.05□□□□□ -0.48
Col8a1Q00780 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Col8a1Q00780 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Col8a1Q00780 Gm7619-201ENSMUST00000210649 1282 ntBASIC12.05□□□□□ -0.48
Col8a1Q00780 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Col8a1Q00780 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC12.05□□□□□ -0.48
Col8a1Q00780 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC12.05□□□□□ -0.48
Col8a1Q00780 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Col8a1Q00780 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC12.05□□□□□ -0.48
Col8a1Q00780 Gm7399-201ENSMUST00000032395 858 ntBASIC12.05□□□□□ -0.48
Col8a1Q00780 Gm6091-201ENSMUST00000098307 165 ntBASIC12.05□□□□□ -0.48
Col8a1Q00780 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC12.05□□□□□ -0.48
Col8a1Q00780 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Col8a1Q00780 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Col8a1Q00780 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Col8a1Q00780 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Col8a1Q00780 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Col8a1Q00780 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Col8a1Q00780 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Col8a1Q00780 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Col8a1Q00780 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Col8a1Q00780 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Col8a1Q00780 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Col8a1Q00780 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Col8a1Q00780 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Col8a1Q00780 AL645783.1-201ENSMUST00000221416 1832 ntBASIC12.04□□□□□ -0.48
Col8a1Q00780 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC12.04□□□□□ -0.48
Col8a1Q00780 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms