Protein–RNA interactions for Protein: P97459

Npas1, Neuronal PAS domain-containing protein 1, mousemouse

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npas1P97459 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC11.91□□□□□ -0.5
Npas1P97459 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC11.91□□□□□ -0.5
Npas1P97459 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Npas1P97459 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Npas1P97459 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Npas1P97459 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Npas1P97459 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Npas1P97459 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Npas1P97459 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Npas1P97459 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Npas1P97459 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Npas1P97459 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Npas1P97459 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Npas1P97459 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Npas1P97459 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Npas1P97459 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Npas1P97459 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Npas1P97459 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Npas1P97459 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Npas1P97459 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Npas1P97459 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Npas1P97459 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Npas1P97459 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Npas1P97459 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Npas1P97459 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
Npas1P97459 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Npas1P97459 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC11.9□□□□□ -0.5
Npas1P97459 AC121801.1-201ENSMUST00000225363 1899 ntBASIC11.9□□□□□ -0.5
Npas1P97459 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Npas1P97459 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Npas1P97459 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Npas1P97459 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Npas1P97459 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Npas1P97459 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Npas1P97459 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Npas1P97459 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Npas1P97459 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Npas1P97459 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Npas1P97459 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Npas1P97459 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Npas1P97459 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC11.9□□□□□ -0.5
Npas1P97459 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Npas1P97459 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Npas1P97459 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.51
Npas1P97459 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Npas1P97459 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Npas1P97459 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Npas1P97459 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Npas1P97459 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Npas1P97459 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Npas1P97459 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Npas1P97459 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC11.89□□□□□ -0.51
Npas1P97459 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Npas1P97459 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Npas1P97459 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Npas1P97459 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Npas1P97459 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Npas1P97459 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Npas1P97459 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Npas1P97459 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Npas1P97459 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Npas1P97459 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Npas1P97459 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Npas1P97459 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC11.89□□□□□ -0.51
Npas1P97459 Mir7071-201ENSMUST00000184847 69 ntBASIC11.89□□□□□ -0.51
Npas1P97459 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC11.89□□□□□ -0.51
Npas1P97459 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Npas1P97459 AC151836.1-202ENSMUST00000226259 753 ntBASIC11.89□□□□□ -0.51
Npas1P97459 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Npas1P97459 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC11.89□□□□□ -0.51
Npas1P97459 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Npas1P97459 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Npas1P97459 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Npas1P97459 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Npas1P97459 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Npas1P97459 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Npas1P97459 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC11.89□□□□□ -0.51
Npas1P97459 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Npas1P97459 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Npas1P97459 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Npas1P97459 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Npas1P97459 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Npas1P97459 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC11.88□□□□□ -0.51
Npas1P97459 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Npas1P97459 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Npas1P97459 Gm7002-201ENSMUST00000221386 2165 ntBASIC11.88□□□□□ -0.51
Npas1P97459 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Npas1P97459 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Npas1P97459 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Npas1P97459 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Npas1P97459 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Npas1P97459 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC11.88□□□□□ -0.51
Npas1P97459 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Npas1P97459 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Npas1P97459 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Npas1P97459 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Npas1P97459 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC11.88□□□□□ -0.51
Npas1P97459 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC11.88□□□□□ -0.51
Npas1P97459 Gm2308-201ENSMUST00000166539 1004 ntBASIC11.88□□□□□ -0.51
Npas1P97459 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC11.88□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms