Protein–RNA interactions for Protein: P70178

Six5, Homeobox protein SIX5, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six5P70178 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC13.28□□□□□ -0.28
Six5P70178 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Six5P70178 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Six5P70178 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Six5P70178 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Six5P70178 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Six5P70178 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC13.28□□□□□ -0.28
Six5P70178 Gm6415-201ENSMUST00000118488 348 ntBASIC13.28□□□□□ -0.28
Six5P70178 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC13.28□□□□□ -0.28
Six5P70178 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC13.28□□□□□ -0.28
Six5P70178 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Six5P70178 Gm28630-201ENSMUST00000187806 498 ntBASIC13.28□□□□□ -0.28
Six5P70178 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC13.28□□□□□ -0.28
Six5P70178 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC13.28□□□□□ -0.28
Six5P70178 AC149588.3-201ENSMUST00000227515 150 ntBASIC13.28□□□□□ -0.28
Six5P70178 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Six5P70178 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC13.28□□□□□ -0.28
Six5P70178 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Six5P70178 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Six5P70178 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Six5P70178 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Six5P70178 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC13.28□□□□□ -0.28
Six5P70178 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Six5P70178 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC13.27□□□□□ -0.28
Six5P70178 Gm6159-201ENSMUST00000191249 1724 ntBASIC13.27□□□□□ -0.28
Six5P70178 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Six5P70178 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Six5P70178 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Six5P70178 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Six5P70178 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Six5P70178 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Six5P70178 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Six5P70178 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Six5P70178 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Six5P70178 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC13.27□□□□□ -0.28
Six5P70178 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Six5P70178 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Six5P70178 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Six5P70178 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC13.27□□□□□ -0.29
Six5P70178 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Six5P70178 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC13.27□□□□□ -0.29
Six5P70178 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC13.27□□□□□ -0.29
Six5P70178 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Six5P70178 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Six5P70178 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC13.27□□□□□ -0.29
Six5P70178 Gm16476-201ENSMUST00000221544 139 ntBASIC13.27□□□□□ -0.29
Six5P70178 AC124732.2-201ENSMUST00000221977 316 ntBASIC13.27□□□□□ -0.29
Six5P70178 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Six5P70178 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Six5P70178 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Six5P70178 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Six5P70178 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Six5P70178 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC13.27□□□□□ -0.29
Six5P70178 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Six5P70178 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Six5P70178 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Six5P70178 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Six5P70178 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC13.27□□□□□ -0.29
Six5P70178 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Six5P70178 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Six5P70178 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Six5P70178 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Six5P70178 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Six5P70178 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Six5P70178 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Six5P70178 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Six5P70178 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Six5P70178 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Six5P70178 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC13.26□□□□□ -0.29
Six5P70178 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Six5P70178 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Six5P70178 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Six5P70178 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC13.26□□□□□ -0.29
Six5P70178 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Six5P70178 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Six5P70178 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Six5P70178 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC13.26□□□□□ -0.29
Six5P70178 Gm24543-201ENSMUST00000103867 82 ntBASIC13.26□□□□□ -0.29
Six5P70178 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Six5P70178 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Six5P70178 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Six5P70178 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Six5P70178 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC13.26□□□□□ -0.29
Six5P70178 Gm15653-201ENSMUST00000119247 907 ntBASIC13.26□□□□□ -0.29
Six5P70178 AA543401-201ENSMUST00000164248 1269 ntBASIC13.26□□□□□ -0.29
Six5P70178 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Six5P70178 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC13.26□□□□□ -0.29
Six5P70178 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Six5P70178 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Six5P70178 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC13.26□□□□□ -0.29
Six5P70178 Fgf17-202ENSMUST00000227123 1336 ntBASIC13.26□□□□□ -0.29
Six5P70178 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Six5P70178 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Six5P70178 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Six5P70178 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Six5P70178 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Six5P70178 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Six5P70178 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Six5P70178 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Six5P70178 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms