Protein–RNA interactions for Protein: P62984

Uba52, Ubiquitin-60S ribosomal protein L40, mousemouse

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Uba52P62984 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Uba52P62984 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Uba52P62984 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Uba52P62984 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Uba52P62984 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Uba52P62984 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC12.34□□□□□ -0.43
Uba52P62984 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Uba52P62984 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Uba52P62984 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Uba52P62984 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Uba52P62984 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Uba52P62984 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Uba52P62984 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC12.34□□□□□ -0.43
Uba52P62984 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Uba52P62984 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Uba52P62984 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC12.34□□□□□ -0.43
Uba52P62984 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Uba52P62984 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.43
Uba52P62984 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.43
Uba52P62984 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.43
Uba52P62984 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Uba52P62984 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
Uba52P62984 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Uba52P62984 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Uba52P62984 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC12.33□□□□□ -0.44
Uba52P62984 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Uba52P62984 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Uba52P62984 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Uba52P62984 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Uba52P62984 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Uba52P62984 Gm38346-201ENSMUST00000192379 2639 ntBASIC12.33□□□□□ -0.44
Uba52P62984 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC12.33□□□□□ -0.44
Uba52P62984 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Uba52P62984 Gm2420-202ENSMUST00000202224 2249 ntBASIC12.33□□□□□ -0.44
Uba52P62984 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Uba52P62984 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Uba52P62984 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
Uba52P62984 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC12.33□□□□□ -0.44
Uba52P62984 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC12.33□□□□□ -0.44
Uba52P62984 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Uba52P62984 Gm27494-201ENSMUST00000184735 189 ntBASIC12.33□□□□□ -0.44
Uba52P62984 AC147366.1-201ENSMUST00000227671 852 ntBASIC12.33□□□□□ -0.44
Uba52P62984 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Uba52P62984 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Uba52P62984 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Uba52P62984 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Uba52P62984 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Uba52P62984 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Uba52P62984 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Uba52P62984 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Uba52P62984 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Uba52P62984 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Uba52P62984 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Uba52P62984 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Uba52P62984 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC12.33□□□□□ -0.44
Uba52P62984 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Uba52P62984 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Uba52P62984 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Uba52P62984 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Uba52P62984 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Uba52P62984 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC12.32□□□□□ -0.44
Uba52P62984 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Uba52P62984 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Uba52P62984 Best4-ps-201ENSMUST00000129783 1380 ntBASIC12.32□□□□□ -0.44
Uba52P62984 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Uba52P62984 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Uba52P62984 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Uba52P62984 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Uba52P62984 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC12.32□□□□□ -0.44
Uba52P62984 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Uba52P62984 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Uba52P62984 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Uba52P62984 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Uba52P62984 Acot6-202ENSMUST00000222921 3622 ntBASIC12.32□□□□□ -0.44
Uba52P62984 Gm42928-201ENSMUST00000197338 3339 ntBASIC12.32□□□□□ -0.44
Uba52P62984 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Uba52P62984 Gm14722-201ENSMUST00000118943 689 ntBASIC12.32□□□□□ -0.44
Uba52P62984 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Uba52P62984 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Uba52P62984 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Uba52P62984 Mir6956-201ENSMUST00000183598 62 ntBASIC12.32□□□□□ -0.44
Uba52P62984 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Uba52P62984 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Uba52P62984 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
Uba52P62984 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Uba52P62984 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Uba52P62984 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC12.32□□□□□ -0.44
Uba52P62984 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Uba52P62984 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC12.32□□□□□ -0.44
Uba52P62984 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Uba52P62984 Gm12626-201ENSMUST00000117339 1983 ntBASIC12.32□□□□□ -0.44
Uba52P62984 Gm12623-201ENSMUST00000119849 1983 ntBASIC12.32□□□□□ -0.44
Uba52P62984 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Uba52P62984 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Uba52P62984 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Uba52P62984 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Uba52P62984 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Uba52P62984 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Uba52P62984 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Uba52P62984 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 46.2 ms