Protein–RNA interactions for Protein: P59235

Nup43, Nucleoporin Nup43, mousemouse

Predictions only

Length 380 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup43P59235 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC13.38□□□□□ -0.27
Nup43P59235 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nup43P59235 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Nup43P59235 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC13.38□□□□□ -0.27
Nup43P59235 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC13.38□□□□□ -0.27
Nup43P59235 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Nup43P59235 AC126408.1-201ENSMUST00000225184 523 ntBASIC13.38□□□□□ -0.27
Nup43P59235 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nup43P59235 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Nup43P59235 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Nup43P59235 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Nup43P59235 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Nup43P59235 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC13.38□□□□□ -0.27
Nup43P59235 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nup43P59235 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Nup43P59235 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nup43P59235 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nup43P59235 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Nup43P59235 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nup43P59235 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nup43P59235 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nup43P59235 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nup43P59235 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nup43P59235 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nup43P59235 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nup43P59235 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nup43P59235 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC13.38□□□□□ -0.27
Nup43P59235 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nup43P59235 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nup43P59235 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC13.37□□□□□ -0.27
Nup43P59235 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Nup43P59235 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nup43P59235 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC13.37□□□□□ -0.27
Nup43P59235 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nup43P59235 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Nup43P59235 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nup43P59235 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nup43P59235 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nup43P59235 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Nup43P59235 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nup43P59235 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nup43P59235 Gm13223-201ENSMUST00000118609 747 ntBASIC13.37□□□□□ -0.27
Nup43P59235 Gm13453-201ENSMUST00000118708 357 ntBASIC13.37□□□□□ -0.27
Nup43P59235 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC13.37□□□□□ -0.27
Nup43P59235 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC13.37□□□□□ -0.27
Nup43P59235 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC13.37□□□□□ -0.27
Nup43P59235 Gm14767-201ENSMUST00000121559 586 ntBASIC13.37□□□□□ -0.27
Nup43P59235 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC13.37□□□□□ -0.27
Nup43P59235 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Nup43P59235 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Nup43P59235 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nup43P59235 Ighv8-14-201ENSMUST00000196781 358 ntBASIC13.37□□□□□ -0.27
Nup43P59235 Gm44344-201ENSMUST00000200287 129 ntBASIC13.37□□□□□ -0.27
Nup43P59235 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Nup43P59235 Gm44608-201ENSMUST00000206827 855 ntBASIC13.37□□□□□ -0.27
Nup43P59235 Gm46209-201ENSMUST00000217912 553 ntBASIC13.37□□□□□ -0.27
Nup43P59235 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC13.37□□□□□ -0.27
Nup43P59235 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nup43P59235 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nup43P59235 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nup43P59235 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Nup43P59235 Nupl1-207ENSMUST00000225311 2475 ntBASIC13.37□□□□□ -0.27
Nup43P59235 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nup43P59235 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nup43P59235 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nup43P59235 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Nup43P59235 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Nup43P59235 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nup43P59235 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nup43P59235 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nup43P59235 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nup43P59235 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nup43P59235 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nup43P59235 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nup43P59235 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC13.36□□□□□ -0.27
Nup43P59235 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Nup43P59235 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Nup43P59235 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nup43P59235 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nup43P59235 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nup43P59235 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nup43P59235 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nup43P59235 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC13.36□□□□□ -0.27
Nup43P59235 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Nup43P59235 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nup43P59235 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Nup43P59235 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC13.36□□□□□ -0.27
Nup43P59235 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Nup43P59235 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Nup43P59235 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC13.36□□□□□ -0.27
Nup43P59235 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Nup43P59235 Ighv1-25-201ENSMUST00000195638 345 ntBASIC13.36□□□□□ -0.27
Nup43P59235 Gm6916-202ENSMUST00000205523 195 ntBASIC13.36□□□□□ -0.27
Nup43P59235 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC13.36□□□□□ -0.27
Nup43P59235 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nup43P59235 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nup43P59235 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nup43P59235 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nup43P59235 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nup43P59235 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms