Protein–RNA interactions for Protein: P51680

Ccr4, C-C chemokine receptor type 4, mousemouse

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccr4P51680 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ccr4P51680 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Ccr4P51680 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC13.13□□□□□ -0.31
Ccr4P51680 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC13.13□□□□□ -0.31
Ccr4P51680 Gm45630-201ENSMUST00000210243 1911 ntBASIC13.13□□□□□ -0.31
Ccr4P51680 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Ccr4P51680 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ccr4P51680 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC13.13□□□□□ -0.31
Ccr4P51680 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Ccr4P51680 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ccr4P51680 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Ccr4P51680 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Ccr4P51680 Gm18737-201ENSMUST00000173594 937 ntBASIC13.13□□□□□ -0.31
Ccr4P51680 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC13.13□□□□□ -0.31
Ccr4P51680 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC13.13□□□□□ -0.31
Ccr4P51680 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Ccr4P51680 AC225888.1-201ENSMUST00000227184 728 ntBASIC13.13□□□□□ -0.31
Ccr4P51680 Gm15500-202ENSMUST00000071641 1019 ntBASIC13.13□□□□□ -0.31
Ccr4P51680 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ccr4P51680 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ccr4P51680 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ccr4P51680 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC13.13□□□□□ -0.31
Ccr4P51680 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC13.13□□□□□ -0.31
Ccr4P51680 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ccr4P51680 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ccr4P51680 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ccr4P51680 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ccr4P51680 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Ccr4P51680 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ccr4P51680 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ccr4P51680 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Ccr4P51680 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC13.13□□□□□ -0.31
Ccr4P51680 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ccr4P51680 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Ccr4P51680 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ccr4P51680 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ccr4P51680 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Ccr4P51680 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ccr4P51680 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ccr4P51680 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ccr4P51680 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Ccr4P51680 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Ccr4P51680 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC13.12□□□□□ -0.31
Ccr4P51680 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Ccr4P51680 AC167013.2-201ENSMUST00000228520 2684 ntBASIC13.12□□□□□ -0.31
Ccr4P51680 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Ccr4P51680 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ccr4P51680 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Ccr4P51680 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Ccr4P51680 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Ccr4P51680 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ccr4P51680 Gm4995-201ENSMUST00000117247 432 ntBASIC13.12□□□□□ -0.31
Ccr4P51680 Gm25911-201ENSMUST00000157621 56 ntBASIC13.12□□□□□ -0.31
Ccr4P51680 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Ccr4P51680 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC13.12□□□□□ -0.31
Ccr4P51680 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC13.12□□□□□ -0.31
Ccr4P51680 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Ccr4P51680 Gm45612-201ENSMUST00000211320 160 ntBASIC13.12□□□□□ -0.31
Ccr4P51680 AC124549.3-201ENSMUST00000225541 367 ntBASIC13.12□□□□□ -0.31
Ccr4P51680 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ccr4P51680 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ccr4P51680 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ccr4P51680 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC13.12□□□□□ -0.31
Ccr4P51680 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ccr4P51680 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ccr4P51680 AC155298.2-201ENSMUST00000225485 6226 ntBASIC13.12□□□□□ -0.31
Ccr4P51680 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Ccr4P51680 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ccr4P51680 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Ccr4P51680 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ccr4P51680 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ccr4P51680 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ccr4P51680 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Ccr4P51680 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ccr4P51680 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC13.12□□□□□ -0.31
Ccr4P51680 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ccr4P51680 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ccr4P51680 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Ccr4P51680 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ccr4P51680 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Ccr4P51680 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ccr4P51680 Gm38391-201ENSMUST00000191720 4069 ntBASIC13.11□□□□□ -0.31
Ccr4P51680 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ccr4P51680 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ccr4P51680 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ccr4P51680 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ccr4P51680 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Ccr4P51680 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ccr4P51680 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ccr4P51680 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ccr4P51680 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC13.11□□□□□ -0.31
Ccr4P51680 Gm14822-201ENSMUST00000122247 291 ntBASIC13.11□□□□□ -0.31
Ccr4P51680 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Ccr4P51680 Gm27494-201ENSMUST00000184735 189 ntBASIC13.11□□□□□ -0.31
Ccr4P51680 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Ccr4P51680 Gm2213-201ENSMUST00000197485 688 ntBASIC13.11□□□□□ -0.31
Ccr4P51680 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC13.11□□□□□ -0.31
Ccr4P51680 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC13.11□□□□□ -0.31
Ccr4P51680 Gm5628-201ENSMUST00000222318 1049 ntBASIC13.11□□□□□ -0.31
Ccr4P51680 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms