Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Shmt1P50431 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Shmt1P50431 Gm44608-201ENSMUST00000206827 855 ntBASIC14.97□□□□□ -0.01
Shmt1P50431 Gm7730-201ENSMUST00000212486 454 ntBASIC14.97□□□□□ -0.01
Shmt1P50431 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC14.97□□□□□ -0.01
Shmt1P50431 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Shmt1P50431 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Shmt1P50431 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Shmt1P50431 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Shmt1P50431 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Shmt1P50431 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC14.97□□□□□ -0.01
Shmt1P50431 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Shmt1P50431 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Shmt1P50431 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC14.97□□□□□ -0.01
Shmt1P50431 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Shmt1P50431 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Shmt1P50431 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Shmt1P50431 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC14.97□□□□□ -0.01
Shmt1P50431 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Shmt1P50431 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Shmt1P50431 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Shmt1P50431 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Shmt1P50431 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Shmt1P50431 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Shmt1P50431 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Shmt1P50431 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Shmt1P50431 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Shmt1P50431 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Shmt1P50431 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Shmt1P50431 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Shmt1P50431 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC14.96□□□□□ -0.01
Shmt1P50431 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Shmt1P50431 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Shmt1P50431 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC14.96□□□□□ -0.01
Shmt1P50431 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
Shmt1P50431 Gm9522-201ENSMUST00000182394 926 ntBASIC14.96□□□□□ -0.01
Shmt1P50431 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Shmt1P50431 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Shmt1P50431 AC154806.6-201ENSMUST00000228192 202 ntBASIC14.96□□□□□ -0.01
Shmt1P50431 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Shmt1P50431 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Shmt1P50431 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Shmt1P50431 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Shmt1P50431 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Shmt1P50431 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Shmt1P50431 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.02
Shmt1P50431 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Shmt1P50431 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Shmt1P50431 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Shmt1P50431 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Shmt1P50431 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Shmt1P50431 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Shmt1P50431 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Shmt1P50431 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Shmt1P50431 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Shmt1P50431 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Shmt1P50431 Gm24694-201ENSMUST00000180054 110 ntBASIC14.95□□□□□ -0.02
Shmt1P50431 Gm27663-201ENSMUST00000184839 110 ntBASIC14.95□□□□□ -0.02
Shmt1P50431 Gm6473-201ENSMUST00000188572 1210 ntBASIC14.95□□□□□ -0.02
Shmt1P50431 AC153872.1-201ENSMUST00000199539 128 ntBASIC14.95□□□□□ -0.02
Shmt1P50431 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Shmt1P50431 AC124732.1-201ENSMUST00000221551 910 ntBASIC14.95□□□□□ -0.02
Shmt1P50431 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Shmt1P50431 AC139350.3-201ENSMUST00000226151 420 ntBASIC14.95□□□□□ -0.02
Shmt1P50431 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Shmt1P50431 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Shmt1P50431 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Shmt1P50431 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Shmt1P50431 Gm38102-201ENSMUST00000192791 1935 ntBASIC14.95□□□□□ -0.02
Shmt1P50431 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Shmt1P50431 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Shmt1P50431 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Shmt1P50431 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Shmt1P50431 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC14.95□□□□□ -0.02
Shmt1P50431 Gm43205-201ENSMUST00000198622 1968 ntBASIC14.94□□□□□ -0.02
Shmt1P50431 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Shmt1P50431 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Shmt1P50431 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Shmt1P50431 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Shmt1P50431 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Shmt1P50431 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Shmt1P50431 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Shmt1P50431 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Shmt1P50431 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Shmt1P50431 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC14.94□□□□□ -0.02
Shmt1P50431 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC14.94□□□□□ -0.02
Shmt1P50431 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC14.94□□□□□ -0.02
Shmt1P50431 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Shmt1P50431 H2-Pa-201ENSMUST00000182803 626 ntBASIC14.94□□□□□ -0.02
Shmt1P50431 Gm44855-201ENSMUST00000205725 362 ntBASIC14.94□□□□□ -0.02
Shmt1P50431 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Shmt1P50431 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Shmt1P50431 AC140375.2-201ENSMUST00000225283 584 ntBASIC14.94□□□□□ -0.02
Shmt1P50431 AC154846.1-201ENSMUST00000226278 862 ntBASIC14.94□□□□□ -0.02
Shmt1P50431 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Shmt1P50431 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC14.94□□□□□ -0.02
Shmt1P50431 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Shmt1P50431 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Shmt1P50431 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Shmt1P50431 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms