Protein–RNA interactions for Protein: P48437

Prox1, Prospero homeobox protein 1, mousemouse

Predictions only

Length 737 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prox1P48437 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Prox1P48437 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Prox1P48437 Gm5366-201ENSMUST00000215494 1338 ntBASIC13.62□□□□□ -0.23
Prox1P48437 Grk6-205ENSMUST00000224653 2976 ntBASIC13.62□□□□□ -0.23
Prox1P48437 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Prox1P48437 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Prox1P48437 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Prox1P48437 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC13.61□□□□□ -0.23
Prox1P48437 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Prox1P48437 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Prox1P48437 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Prox1P48437 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC13.61□□□□□ -0.23
Prox1P48437 AC025913.2-201ENSMUST00000220136 1766 ntBASIC13.61□□□□□ -0.23
Prox1P48437 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Prox1P48437 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Prox1P48437 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Prox1P48437 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Prox1P48437 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC13.61□□□□□ -0.23
Prox1P48437 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Prox1P48437 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC13.61□□□□□ -0.23
Prox1P48437 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Prox1P48437 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Prox1P48437 AC161829.1-201ENSMUST00000220298 281 ntBASIC13.61□□□□□ -0.23
Prox1P48437 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Prox1P48437 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Prox1P48437 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Prox1P48437 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Prox1P48437 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Prox1P48437 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Prox1P48437 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Prox1P48437 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Prox1P48437 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC13.61□□□□□ -0.23
Prox1P48437 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Prox1P48437 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Prox1P48437 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Prox1P48437 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Prox1P48437 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Prox1P48437 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Prox1P48437 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Prox1P48437 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Prox1P48437 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Prox1P48437 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Prox1P48437 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC13.61□□□□□ -0.23
Prox1P48437 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Prox1P48437 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Prox1P48437 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC13.61□□□□□ -0.23
Prox1P48437 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Prox1P48437 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Prox1P48437 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Prox1P48437 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Prox1P48437 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Prox1P48437 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Prox1P48437 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Prox1P48437 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Prox1P48437 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Prox1P48437 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Prox1P48437 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Prox1P48437 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Prox1P48437 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Prox1P48437 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Prox1P48437 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC13.6□□□□□ -0.23
Prox1P48437 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Prox1P48437 Gm4899-201ENSMUST00000178708 719 ntBASIC13.6□□□□□ -0.23
Prox1P48437 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Prox1P48437 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Prox1P48437 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Prox1P48437 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Prox1P48437 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Prox1P48437 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Prox1P48437 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Prox1P48437 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Prox1P48437 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Prox1P48437 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Prox1P48437 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Prox1P48437 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC13.6□□□□□ -0.23
Prox1P48437 AC119177.1-201ENSMUST00000227647 1332 ntBASIC13.6□□□□□ -0.23
Prox1P48437 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Prox1P48437 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC13.6□□□□□ -0.23
Prox1P48437 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Prox1P48437 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC13.6□□□□□ -0.23
Prox1P48437 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Prox1P48437 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Prox1P48437 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Prox1P48437 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Prox1P48437 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Prox1P48437 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Prox1P48437 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC13.59□□□□□ -0.23
Prox1P48437 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC13.59□□□□□ -0.23
Prox1P48437 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Prox1P48437 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Prox1P48437 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC13.59□□□□□ -0.23
Prox1P48437 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Prox1P48437 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Prox1P48437 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Prox1P48437 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC13.59□□□□□ -0.23
Prox1P48437 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC13.59□□□□□ -0.23
Prox1P48437 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC13.59□□□□□ -0.23
Prox1P48437 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC13.59□□□□□ -0.23
Prox1P48437 AW822252-206ENSMUST00000208904 237 ntBASIC13.59□□□□□ -0.23
Prox1P48437 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC13.59□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms