Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cxcl12P40224 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cxcl12P40224 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cxcl12P40224 Ewsr1-201ENSMUST00000063232 1320 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Cxcl12P40224 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cxcl12P40224 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Cxcl12P40224 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Cxcl12P40224 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Cxcl12P40224 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC14.47□□□□□ -0.09
Cxcl12P40224 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC14.47□□□□□ -0.09
Cxcl12P40224 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Cxcl12P40224 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
Cxcl12P40224 Gm38000-201ENSMUST00000192390 1215 ntBASIC14.47□□□□□ -0.09
Cxcl12P40224 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC14.47□□□□□ -0.09
Cxcl12P40224 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cxcl12P40224 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cxcl12P40224 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cxcl12P40224 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cxcl12P40224 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cxcl12P40224 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cxcl12P40224 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cxcl12P40224 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC14.47□□□□□ -0.09
Cxcl12P40224 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cxcl12P40224 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cxcl12P40224 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Cxcl12P40224 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cxcl12P40224 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Cxcl12P40224 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cxcl12P40224 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cxcl12P40224 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Cxcl12P40224 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC14.46□□□□□ -0.09
Cxcl12P40224 Gm42471-201ENSMUST00000201457 1865 ntBASIC14.46□□□□□ -0.09
Cxcl12P40224 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cxcl12P40224 Gm10710-201ENSMUST00000047876 3971 ntBASIC14.46□□□□□ -0.09
Cxcl12P40224 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cxcl12P40224 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cxcl12P40224 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
Cxcl12P40224 Gm42900-201ENSMUST00000197184 2167 ntBASIC14.46□□□□□ -0.09
Cxcl12P40224 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Cxcl12P40224 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cxcl12P40224 Gm12203-201ENSMUST00000118235 598 ntBASIC14.46□□□□□ -0.09
Cxcl12P40224 Gm12241-201ENSMUST00000118330 726 ntBASIC14.46□□□□□ -0.09
Cxcl12P40224 Gm12209-201ENSMUST00000120089 596 ntBASIC14.46□□□□□ -0.09
Cxcl12P40224 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Cxcl12P40224 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cxcl12P40224 Gm4271-201ENSMUST00000174444 973 ntBASIC14.46□□□□□ -0.09
Cxcl12P40224 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC14.46□□□□□ -0.09
Cxcl12P40224 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC14.46□□□□□ -0.09
Cxcl12P40224 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cxcl12P40224 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cxcl12P40224 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cxcl12P40224 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cxcl12P40224 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cxcl12P40224 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Cxcl12P40224 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cxcl12P40224 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Cxcl12P40224 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC14.46□□□□□ -0.09
Cxcl12P40224 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cxcl12P40224 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Cxcl12P40224 Gm42901-201ENSMUST00000197735 3171 ntBASIC14.46□□□□□ -0.1
Cxcl12P40224 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.1
Cxcl12P40224 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Cxcl12P40224 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC14.45□□□□□ -0.1
Cxcl12P40224 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cxcl12P40224 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Cxcl12P40224 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cxcl12P40224 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC14.45□□□□□ -0.1
Cxcl12P40224 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Cxcl12P40224 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Cxcl12P40224 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Cxcl12P40224 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Cxcl12P40224 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC14.45□□□□□ -0.1
Cxcl12P40224 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Cxcl12P40224 4933424G06Rik-204ENSMUST00000208994 1120 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cxcl12P40224 Cts7-204ENSMUST00000225321 1257 ntBASIC14.45□□□□□ -0.1
Cxcl12P40224 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC14.45□□□□□ -0.1
Cxcl12P40224 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cxcl12P40224 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cxcl12P40224 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cxcl12P40224 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC14.45□□□□□ -0.1
Cxcl12P40224 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cxcl12P40224 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Cxcl12P40224 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cxcl12P40224 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC14.45□□□□□ -0.1
Cxcl12P40224 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cxcl12P40224 AC161252.3-201ENSMUST00000225465 1549 ntBASIC14.45□□□□□ -0.1
Cxcl12P40224 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cxcl12P40224 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cxcl12P40224 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cxcl12P40224 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC14.45□□□□□ -0.1
Cxcl12P40224 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cxcl12P40224 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Cxcl12P40224 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cxcl12P40224 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cxcl12P40224 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Cxcl12P40224 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cxcl12P40224 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cxcl12P40224 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Cxcl12P40224 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Cxcl12P40224 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 54.5 ms