Protein–RNA interactions for Protein: P40201

Chd1, Chromodomain-helicase-DNA-binding protein 1, mousemouse

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1P40201 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Chd1P40201 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Chd1P40201 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
Chd1P40201 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Chd1P40201 Lamr1-ps1-201ENSMUST00000119759 874 ntBASIC20.87■□□□□ 0.93
Chd1P40201 Gm12208-201ENSMUST00000122004 163 ntBASIC20.87■□□□□ 0.93
Chd1P40201 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Chd1P40201 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC20.87■□□□□ 0.93
Chd1P40201 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
Chd1P40201 4930596D02Rik-201ENSMUST00000043266 1160 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Chd1P40201 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Chd1P40201 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Chd1P40201 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Chd1P40201 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Chd1P40201 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Chd1P40201 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Chd1P40201 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Chd1P40201 Gm19221-201ENSMUST00000221827 1477 ntBASIC20.87■□□□□ 0.93
Chd1P40201 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Chd1P40201 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Chd1P40201 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC20.87■□□□□ 0.93
Chd1P40201 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC20.87■□□□□ 0.93
Chd1P40201 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
Chd1P40201 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC20.87■□□□□ 0.93
Chd1P40201 Cotl1-203ENSMUST00000211873 826 ntTSL 5 BASIC20.87■□□□□ 0.93
Chd1P40201 Mrpl18-201ENSMUST00000079121 1219 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Chd1P40201 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Chd1P40201 Gm6159-201ENSMUST00000191249 1724 ntBASIC20.86■□□□□ 0.93
Chd1P40201 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Chd1P40201 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC20.86■□□□□ 0.93
Chd1P40201 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Chd1P40201 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Chd1P40201 AC167669.2-201ENSMUST00000224417 1620 ntBASIC20.86■□□□□ 0.93
Chd1P40201 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Chd1P40201 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Chd1P40201 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC20.86■□□□□ 0.93
Chd1P40201 Gm8566-201ENSMUST00000120174 465 ntBASIC20.86■□□□□ 0.93
Chd1P40201 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Chd1P40201 Gm20628-201ENSMUST00000177363 3215 ntBASIC20.86■□□□□ 0.93
Chd1P40201 Gm29087-201ENSMUST00000186462 645 ntTSL 5 BASIC20.86■□□□□ 0.93
Chd1P40201 Gm44262-201ENSMUST00000204969 372 ntBASIC20.86■□□□□ 0.93
Chd1P40201 Gm13097-201ENSMUST00000210722 397 ntBASIC20.86■□□□□ 0.93
Chd1P40201 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC20.86■□□□□ 0.93
Chd1P40201 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Chd1P40201 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Chd1P40201 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Chd1P40201 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Chd1P40201 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Chd1P40201 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC20.85■□□□□ 0.93
Chd1P40201 Pla2g1b-202ENSMUST00000112071 361 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Chd1P40201 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC20.85■□□□□ 0.93
Chd1P40201 1110038B12Rik-203ENSMUST00000173070 434 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Chd1P40201 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC20.85■□□□□ 0.93
Chd1P40201 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Chd1P40201 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
Chd1P40201 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC20.85■□□□□ 0.93
Chd1P40201 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC20.85■□□□□ 0.93
Chd1P40201 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Chd1P40201 Gm5884-201ENSMUST00000036712 1479 ntBASIC20.85■□□□□ 0.93
Chd1P40201 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Chd1P40201 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Chd1P40201 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Chd1P40201 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Chd1P40201 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC20.84■□□□□ 0.93
Chd1P40201 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
Chd1P40201 Gm44545-201ENSMUST00000208262 746 ntBASIC20.84■□□□□ 0.93
Chd1P40201 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Chd1P40201 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC20.84■□□□□ 0.93
Chd1P40201 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Chd1P40201 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Chd1P40201 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Chd1P40201 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC20.84■□□□□ 0.93
Chd1P40201 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Chd1P40201 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Chd1P40201 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Chd1P40201 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
Chd1P40201 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Chd1P40201 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC20.84■□□□□ 0.93
Chd1P40201 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Chd1P40201 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
Chd1P40201 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Chd1P40201 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Chd1P40201 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
Chd1P40201 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
Chd1P40201 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC20.84■□□□□ 0.93
Chd1P40201 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC20.84■□□□□ 0.93
Chd1P40201 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Chd1P40201 Gm27046-201ENSMUST00000182160 463 ntBASIC20.84■□□□□ 0.93
Chd1P40201 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC20.84■□□□□ 0.93
Chd1P40201 Cryab-201ENSMUST00000034562 946 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Chd1P40201 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Chd1P40201 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Chd1P40201 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Chd1P40201 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Chd1P40201 Gm14109-201ENSMUST00000118814 309 ntBASIC20.83■□□□□ 0.92
Chd1P40201 Gm6447-201ENSMUST00000118905 835 ntBASIC20.83■□□□□ 0.92
Chd1P40201 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
Chd1P40201 Gm8738-201ENSMUST00000172606 329 ntBASIC20.83■□□□□ 0.92
Chd1P40201 Gm25700-201ENSMUST00000177693 110 ntBASIC20.83■□□□□ 0.92
Chd1P40201 Gm45765-201ENSMUST00000212027 1035 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 48.1 ms