Protein–RNA interactions for Protein: P24549

Aldh1a1, Retinal dehydrogenase 1, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Aldh1a1P24549 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Aldh1a1P24549 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Aldh1a1P24549 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Aldh1a1P24549 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Aldh1a1P24549 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Aldh1a1P24549 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Aldh1a1P24549 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Aldh1a1P24549 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Aldh1a1P24549 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Aldh1a1P24549 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Aldh1a1P24549 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Aldh1a1P24549 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC15.15■□□□□ 0.02
Aldh1a1P24549 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Aldh1a1P24549 Gm8565-201ENSMUST00000183259 1014 ntBASIC15.15■□□□□ 0.02
Aldh1a1P24549 Gm7172-201ENSMUST00000218047 1152 ntBASIC15.15■□□□□ 0.02
Aldh1a1P24549 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Aldh1a1P24549 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Aldh1a1P24549 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Aldh1a1P24549 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Aldh1a1P24549 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Aldh1a1P24549 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC15.15■□□□□ 0.02
Aldh1a1P24549 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Aldh1a1P24549 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Aldh1a1P24549 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Aldh1a1P24549 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Aldh1a1P24549 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Aldh1a1P24549 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Aldh1a1P24549 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Aldh1a1P24549 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Aldh1a1P24549 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Aldh1a1P24549 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Aldh1a1P24549 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Aldh1a1P24549 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Aldh1a1P24549 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Aldh1a1P24549 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Aldh1a1P24549 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Aldh1a1P24549 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC15.14■□□□□ 0.01
Aldh1a1P24549 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC15.14■□□□□ 0.01
Aldh1a1P24549 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Aldh1a1P24549 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC15.14■□□□□ 0.01
Aldh1a1P24549 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Aldh1a1P24549 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Aldh1a1P24549 Gm5187-201ENSMUST00000117317 991 ntBASIC15.14■□□□□ 0.01
Aldh1a1P24549 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC15.14■□□□□ 0.01
Aldh1a1P24549 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC15.14■□□□□ 0.01
Aldh1a1P24549 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC15.14■□□□□ 0.01
Aldh1a1P24549 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC15.14■□□□□ 0.01
Aldh1a1P24549 Gm38223-201ENSMUST00000194484 695 ntBASIC15.14■□□□□ 0.01
Aldh1a1P24549 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Aldh1a1P24549 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC15.14■□□□□ 0.01
Aldh1a1P24549 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Aldh1a1P24549 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Aldh1a1P24549 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Aldh1a1P24549 Gm43352-201ENSMUST00000196419 3065 ntBASIC15.14■□□□□ 0.01
Aldh1a1P24549 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Aldh1a1P24549 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Aldh1a1P24549 AC114543.1-201ENSMUST00000226451 1558 ntBASIC15.14■□□□□ 0.01
Aldh1a1P24549 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Aldh1a1P24549 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Aldh1a1P24549 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Aldh1a1P24549 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Aldh1a1P24549 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Aldh1a1P24549 AC154412.1-201ENSMUST00000226540 2786 ntBASIC15.13■□□□□ 0.01
Aldh1a1P24549 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Aldh1a1P24549 Gm21038-201ENSMUST00000222205 1383 ntBASIC15.13■□□□□ 0.01
Aldh1a1P24549 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Aldh1a1P24549 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Aldh1a1P24549 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Aldh1a1P24549 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Aldh1a1P24549 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC15.13■□□□□ 0.01
Aldh1a1P24549 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC15.13■□□□□ 0.01
Aldh1a1P24549 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Aldh1a1P24549 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Aldh1a1P24549 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Aldh1a1P24549 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Aldh1a1P24549 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Aldh1a1P24549 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Aldh1a1P24549 Gm12485-201ENSMUST00000119641 291 ntBASIC15.13■□□□□ 0.01
Aldh1a1P24549 Gm15376-201ENSMUST00000122258 783 ntBASIC15.13■□□□□ 0.01
Aldh1a1P24549 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC15.13■□□□□ 0.01
Aldh1a1P24549 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC15.13■□□□□ 0.01
Aldh1a1P24549 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Aldh1a1P24549 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC15.13■□□□□ 0.01
Aldh1a1P24549 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC15.13■□□□□ 0.01
Aldh1a1P24549 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC15.13■□□□□ 0.01
Aldh1a1P24549 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Aldh1a1P24549 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Aldh1a1P24549 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Aldh1a1P24549 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Aldh1a1P24549 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Aldh1a1P24549 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Aldh1a1P24549 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Aldh1a1P24549 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Aldh1a1P24549 Ccdc166-201ENSMUST00000182172 2584 ntBASIC15.13■□□□□ 0.01
Aldh1a1P24549 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Aldh1a1P24549 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Aldh1a1P24549 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Aldh1a1P24549 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC15.12■□□□□ 0.01
Aldh1a1P24549 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Aldh1a1P24549 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 50.5 ms