Protein–RNA interactions for Protein: O88879

Apaf1, Apoptotic protease-activating factor 1, mousemouse

Predictions only

Length 1,249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Apaf1O88879 Gm45195-201ENSMUST00000205597 1008 ntBASIC18.39■□□□□ 0.53
Apaf1O88879 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Apaf1O88879 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Apaf1O88879 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC18.39■□□□□ 0.53
Apaf1O88879 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Apaf1O88879 Gm3365-201ENSMUST00000216296 1480 ntBASIC18.39■□□□□ 0.53
Apaf1O88879 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Apaf1O88879 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Apaf1O88879 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Apaf1O88879 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Apaf1O88879 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Apaf1O88879 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Apaf1O88879 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC18.38■□□□□ 0.53
Apaf1O88879 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Apaf1O88879 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Apaf1O88879 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC18.38■□□□□ 0.53
Apaf1O88879 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC18.38■□□□□ 0.53
Apaf1O88879 Gm18027-201ENSMUST00000218947 619 ntBASIC18.38■□□□□ 0.53
Apaf1O88879 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Apaf1O88879 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Apaf1O88879 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Apaf1O88879 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Apaf1O88879 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Apaf1O88879 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Apaf1O88879 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
Apaf1O88879 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Apaf1O88879 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Apaf1O88879 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Apaf1O88879 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Apaf1O88879 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Apaf1O88879 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Apaf1O88879 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Apaf1O88879 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Apaf1O88879 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Apaf1O88879 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Apaf1O88879 Gm42471-201ENSMUST00000201457 1865 ntBASIC18.37■□□□□ 0.53
Apaf1O88879 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Apaf1O88879 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Apaf1O88879 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Apaf1O88879 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Apaf1O88879 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
Apaf1O88879 Gm10766-202ENSMUST00000194123 606 ntBASIC18.37■□□□□ 0.53
Apaf1O88879 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Apaf1O88879 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC18.37■□□□□ 0.53
Apaf1O88879 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Apaf1O88879 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
Apaf1O88879 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Apaf1O88879 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Apaf1O88879 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Apaf1O88879 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Apaf1O88879 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Apaf1O88879 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Apaf1O88879 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Apaf1O88879 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Apaf1O88879 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Apaf1O88879 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Apaf1O88879 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Apaf1O88879 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Apaf1O88879 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Apaf1O88879 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Apaf1O88879 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Apaf1O88879 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Apaf1O88879 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Apaf1O88879 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC18.36■□□□□ 0.53
Apaf1O88879 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Apaf1O88879 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Apaf1O88879 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Apaf1O88879 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC18.36■□□□□ 0.53
Apaf1O88879 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Apaf1O88879 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC18.36■□□□□ 0.53
Apaf1O88879 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC18.36■□□□□ 0.53
Apaf1O88879 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC18.36■□□□□ 0.53
Apaf1O88879 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC18.36■□□□□ 0.53
Apaf1O88879 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC18.36■□□□□ 0.53
Apaf1O88879 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Apaf1O88879 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC18.36■□□□□ 0.53
Apaf1O88879 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Apaf1O88879 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC18.36■□□□□ 0.53
Apaf1O88879 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Apaf1O88879 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Apaf1O88879 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC18.36■□□□□ 0.53
Apaf1O88879 Hist1h2al-201ENSMUST00000091708 339 ntBASIC18.36■□□□□ 0.53
Apaf1O88879 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Apaf1O88879 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Apaf1O88879 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Apaf1O88879 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Apaf1O88879 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Apaf1O88879 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Apaf1O88879 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Apaf1O88879 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Apaf1O88879 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Apaf1O88879 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Apaf1O88879 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Apaf1O88879 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
Apaf1O88879 Gm6283-201ENSMUST00000182369 1000 ntBASIC18.35■□□□□ 0.53
Apaf1O88879 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Apaf1O88879 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC18.35■□□□□ 0.53
Apaf1O88879 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC18.35■□□□□ 0.53
Apaf1O88879 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Apaf1O88879 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 48.8 ms