Protein–RNA interactions for Protein: O88545

Cops6, COP9 signalosome complex subunit 6, mousemouse

Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops6O88545 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cops6O88545 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Cops6O88545 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Cops6O88545 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Cops6O88545 Gm15376-201ENSMUST00000122258 783 ntBASIC17.22■□□□□ 0.35
Cops6O88545 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Cops6O88545 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC17.22■□□□□ 0.35
Cops6O88545 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cops6O88545 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Cops6O88545 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC17.22■□□□□ 0.35
Cops6O88545 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Cops6O88545 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Cops6O88545 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Cops6O88545 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Cops6O88545 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cops6O88545 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cops6O88545 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Cops6O88545 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Cops6O88545 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC17.21■□□□□ 0.35
Cops6O88545 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC17.21■□□□□ 0.35
Cops6O88545 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cops6O88545 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cops6O88545 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cops6O88545 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cops6O88545 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
Cops6O88545 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cops6O88545 Gm44645-201ENSMUST00000205492 1653 ntBASIC17.21■□□□□ 0.35
Cops6O88545 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Cops6O88545 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
Cops6O88545 Gm6244-201ENSMUST00000178732 841 ntBASIC17.21■□□□□ 0.35
Cops6O88545 Gm2495-201ENSMUST00000191160 466 ntBASIC17.21■□□□□ 0.35
Cops6O88545 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cops6O88545 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cops6O88545 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cops6O88545 Gm5356-201ENSMUST00000093326 615 ntBASIC17.21■□□□□ 0.35
Cops6O88545 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Cops6O88545 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cops6O88545 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cops6O88545 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cops6O88545 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Cops6O88545 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cops6O88545 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Cops6O88545 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
Cops6O88545 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cops6O88545 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cops6O88545 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cops6O88545 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cops6O88545 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cops6O88545 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cops6O88545 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cops6O88545 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC17.2■□□□□ 0.34
Cops6O88545 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC17.2■□□□□ 0.34
Cops6O88545 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cops6O88545 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Cops6O88545 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cops6O88545 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cops6O88545 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cops6O88545 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Cops6O88545 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cops6O88545 Gm9347-201ENSMUST00000211473 1607 ntBASIC17.2■□□□□ 0.34
Cops6O88545 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cops6O88545 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cops6O88545 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cops6O88545 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Cops6O88545 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cops6O88545 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cops6O88545 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Cops6O88545 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cops6O88545 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cops6O88545 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Cops6O88545 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cops6O88545 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cops6O88545 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cops6O88545 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Cops6O88545 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cops6O88545 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cops6O88545 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cops6O88545 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cops6O88545 CT010478.1-201ENSMUST00000220747 2787 ntBASIC17.19■□□□□ 0.34
Cops6O88545 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Cops6O88545 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Cops6O88545 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Cops6O88545 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Cops6O88545 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Cops6O88545 Gm26464-201ENSMUST00000157094 305 ntBASIC17.19■□□□□ 0.34
Cops6O88545 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Cops6O88545 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Cops6O88545 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC17.19■□□□□ 0.34
Cops6O88545 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cops6O88545 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cops6O88545 Gm37411-201ENSMUST00000194180 2282 ntBASIC17.19■□□□□ 0.34
Cops6O88545 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC17.19■□□□□ 0.34
Cops6O88545 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cops6O88545 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cops6O88545 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cops6O88545 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Cops6O88545 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cops6O88545 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Cops6O88545 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Cops6O88545 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms