Protein–RNA interactions for Protein: O54965

Rnf13, E3 ubiquitin-protein ligase RNF13, mousemouse

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf13O54965 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rnf13O54965 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC12.86□□□□□ -0.35
Rnf13O54965 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC12.86□□□□□ -0.35
Rnf13O54965 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rnf13O54965 Gm12626-201ENSMUST00000117339 1983 ntBASIC12.86□□□□□ -0.35
Rnf13O54965 Gm12623-201ENSMUST00000119849 1983 ntBASIC12.86□□□□□ -0.35
Rnf13O54965 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rnf13O54965 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rnf13O54965 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rnf13O54965 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
Rnf13O54965 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Rnf13O54965 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rnf13O54965 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Rnf13O54965 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC12.86□□□□□ -0.35
Rnf13O54965 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC12.86□□□□□ -0.35
Rnf13O54965 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rnf13O54965 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rnf13O54965 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Rnf13O54965 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rnf13O54965 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Rnf13O54965 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Rnf13O54965 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Rnf13O54965 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rnf13O54965 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Rnf13O54965 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Rnf13O54965 Gm38197-201ENSMUST00000192320 2122 ntBASIC12.85□□□□□ -0.35
Rnf13O54965 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rnf13O54965 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rnf13O54965 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC12.85□□□□□ -0.35
Rnf13O54965 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rnf13O54965 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rnf13O54965 Gm16198-201ENSMUST00000118766 670 ntBASIC12.85□□□□□ -0.35
Rnf13O54965 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC12.85□□□□□ -0.35
Rnf13O54965 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC12.85□□□□□ -0.35
Rnf13O54965 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Rnf13O54965 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Rnf13O54965 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC12.85□□□□□ -0.35
Rnf13O54965 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC12.85□□□□□ -0.35
Rnf13O54965 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rnf13O54965 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC12.85□□□□□ -0.35
Rnf13O54965 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC12.85□□□□□ -0.35
Rnf13O54965 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rnf13O54965 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Rnf13O54965 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Rnf13O54965 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rnf13O54965 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rnf13O54965 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rnf13O54965 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rnf13O54965 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rnf13O54965 Gm13233-201ENSMUST00000118760 1443 ntBASIC12.85□□□□□ -0.35
Rnf13O54965 Gm13244-201ENSMUST00000118855 1446 ntBASIC12.85□□□□□ -0.35
Rnf13O54965 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rnf13O54965 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Rnf13O54965 Il17rd-203ENSMUST00000225146 3366 ntBASIC12.85□□□□□ -0.35
Rnf13O54965 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rnf13O54965 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC12.85□□□□□ -0.35
Rnf13O54965 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Rnf13O54965 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rnf13O54965 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rnf13O54965 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Rnf13O54965 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rnf13O54965 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rnf13O54965 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Rnf13O54965 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rnf13O54965 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rnf13O54965 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rnf13O54965 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rnf13O54965 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Rnf13O54965 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Rnf13O54965 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Rnf13O54965 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC12.84□□□□□ -0.35
Rnf13O54965 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rnf13O54965 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Rnf13O54965 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC12.84□□□□□ -0.35
Rnf13O54965 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC12.84□□□□□ -0.35
Rnf13O54965 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rnf13O54965 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rnf13O54965 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Rnf13O54965 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rnf13O54965 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rnf13O54965 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC12.84□□□□□ -0.35
Rnf13O54965 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC12.84□□□□□ -0.35
Rnf13O54965 Mir5126-201ENSMUST00000175513 77 ntBASIC12.84□□□□□ -0.35
Rnf13O54965 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Rnf13O54965 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rnf13O54965 Gm18195-201ENSMUST00000207604 706 ntBASIC12.84□□□□□ -0.35
Rnf13O54965 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC12.84□□□□□ -0.35
Rnf13O54965 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rnf13O54965 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC12.84□□□□□ -0.35
Rnf13O54965 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rnf13O54965 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rnf13O54965 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rnf13O54965 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Rnf13O54965 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rnf13O54965 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Rnf13O54965 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rnf13O54965 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rnf13O54965 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Rnf13O54965 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rnf13O54965 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 49.3 ms