Protein–RNA interactions for Protein: O54785

Limk2, LIM domain kinase 2, mousemouse

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Limk2O54785 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Limk2O54785 Mir125a-201ENSMUST00000083545 68 ntBASIC14.39□□□□□ -0.11
Limk2O54785 Hist1h2al-201ENSMUST00000091708 339 ntBASIC14.39□□□□□ -0.11
Limk2O54785 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Limk2O54785 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Limk2O54785 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Limk2O54785 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC14.39□□□□□ -0.11
Limk2O54785 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Limk2O54785 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Limk2O54785 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Limk2O54785 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Limk2O54785 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Limk2O54785 Syt7-204ENSMUST00000223586 1344 ntBASIC14.39□□□□□ -0.11
Limk2O54785 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Limk2O54785 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Limk2O54785 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Limk2O54785 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Limk2O54785 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Limk2O54785 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Limk2O54785 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Limk2O54785 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
Limk2O54785 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Limk2O54785 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Limk2O54785 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Limk2O54785 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Limk2O54785 Gm24543-201ENSMUST00000103867 82 ntBASIC14.38□□□□□ -0.11
Limk2O54785 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC14.38□□□□□ -0.11
Limk2O54785 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC14.38□□□□□ -0.11
Limk2O54785 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC14.38□□□□□ -0.11
Limk2O54785 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Limk2O54785 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Limk2O54785 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Limk2O54785 Gm16476-201ENSMUST00000221544 139 ntBASIC14.38□□□□□ -0.11
Limk2O54785 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Limk2O54785 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Limk2O54785 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Limk2O54785 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Limk2O54785 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Limk2O54785 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Limk2O54785 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Limk2O54785 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Limk2O54785 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Limk2O54785 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Limk2O54785 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Limk2O54785 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Limk2O54785 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Limk2O54785 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Limk2O54785 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Limk2O54785 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Limk2O54785 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC14.37□□□□□ -0.11
Limk2O54785 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Limk2O54785 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Limk2O54785 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Limk2O54785 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Limk2O54785 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Limk2O54785 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Limk2O54785 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC14.37□□□□□ -0.11
Limk2O54785 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC14.37□□□□□ -0.11
Limk2O54785 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Limk2O54785 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
Limk2O54785 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Limk2O54785 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Limk2O54785 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Limk2O54785 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC14.37□□□□□ -0.11
Limk2O54785 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC14.37□□□□□ -0.11
Limk2O54785 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Limk2O54785 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC14.37□□□□□ -0.11
Limk2O54785 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Limk2O54785 Gm7775-201ENSMUST00000218871 853 ntBASIC14.37□□□□□ -0.11
Limk2O54785 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC14.37□□□□□ -0.11
Limk2O54785 AC124732.1-201ENSMUST00000221551 910 ntBASIC14.37□□□□□ -0.11
Limk2O54785 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Limk2O54785 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Limk2O54785 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Limk2O54785 AC121801.1-201ENSMUST00000225363 1899 ntBASIC14.37□□□□□ -0.11
Limk2O54785 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Limk2O54785 Gm3365-201ENSMUST00000216296 1480 ntBASIC14.37□□□□□ -0.11
Limk2O54785 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Limk2O54785 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Limk2O54785 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Limk2O54785 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
Limk2O54785 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Limk2O54785 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Limk2O54785 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Limk2O54785 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Limk2O54785 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Limk2O54785 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Limk2O54785 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Limk2O54785 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Limk2O54785 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Limk2O54785 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Limk2O54785 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Limk2O54785 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Limk2O54785 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Limk2O54785 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Limk2O54785 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Limk2O54785 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Limk2O54785 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Limk2O54785 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC14.36□□□□□ -0.11
Limk2O54785 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms