Protein–RNA interactions for Protein: J3QP07

B020004C17Rik, RIKEN cDNA B020004C17 gene, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
B020004C17RikJ3QP07 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
B020004C17RikJ3QP07 Gm13730-201ENSMUST00000121036 1462 ntBASIC15.71■□□□□ 0.1
B020004C17RikJ3QP07 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.1
B020004C17RikJ3QP07 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
B020004C17RikJ3QP07 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
B020004C17RikJ3QP07 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
B020004C17RikJ3QP07 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
B020004C17RikJ3QP07 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
B020004C17RikJ3QP07 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC15.7■□□□□ 0.1
B020004C17RikJ3QP07 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
B020004C17RikJ3QP07 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
B020004C17RikJ3QP07 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC15.7■□□□□ 0.1
B020004C17RikJ3QP07 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
B020004C17RikJ3QP07 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
B020004C17RikJ3QP07 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
B020004C17RikJ3QP07 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
B020004C17RikJ3QP07 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
B020004C17RikJ3QP07 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC15.7■□□□□ 0.1
B020004C17RikJ3QP07 AC126549.2-201ENSMUST00000223997 1976 ntBASIC15.7■□□□□ 0.1
B020004C17RikJ3QP07 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC15.7■□□□□ 0.1
B020004C17RikJ3QP07 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
B020004C17RikJ3QP07 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
B020004C17RikJ3QP07 Gm8810-201ENSMUST00000172895 754 ntBASIC15.7■□□□□ 0.1
B020004C17RikJ3QP07 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC15.7■□□□□ 0.1
B020004C17RikJ3QP07 Gm27331-201ENSMUST00000183705 60 ntBASIC15.7■□□□□ 0.1
B020004C17RikJ3QP07 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC15.7■□□□□ 0.1
B020004C17RikJ3QP07 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC15.7■□□□□ 0.1
B020004C17RikJ3QP07 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
B020004C17RikJ3QP07 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
B020004C17RikJ3QP07 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
B020004C17RikJ3QP07 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
B020004C17RikJ3QP07 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
B020004C17RikJ3QP07 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
B020004C17RikJ3QP07 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
B020004C17RikJ3QP07 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
B020004C17RikJ3QP07 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
B020004C17RikJ3QP07 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
B020004C17RikJ3QP07 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
B020004C17RikJ3QP07 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
B020004C17RikJ3QP07 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
B020004C17RikJ3QP07 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
B020004C17RikJ3QP07 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
B020004C17RikJ3QP07 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
B020004C17RikJ3QP07 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC15.69■□□□□ 0.1
B020004C17RikJ3QP07 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
B020004C17RikJ3QP07 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
B020004C17RikJ3QP07 Gm9347-201ENSMUST00000211473 1607 ntBASIC15.69■□□□□ 0.1
B020004C17RikJ3QP07 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
B020004C17RikJ3QP07 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
B020004C17RikJ3QP07 Camk2g-217ENSMUST00000226630 1937 ntBASIC15.69■□□□□ 0.1
B020004C17RikJ3QP07 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
B020004C17RikJ3QP07 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
B020004C17RikJ3QP07 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
B020004C17RikJ3QP07 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC15.69■□□□□ 0.1
B020004C17RikJ3QP07 CU024892.2-201ENSMUST00000224608 832 ntBASIC15.69■□□□□ 0.1
B020004C17RikJ3QP07 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
B020004C17RikJ3QP07 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
B020004C17RikJ3QP07 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
B020004C17RikJ3QP07 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
B020004C17RikJ3QP07 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
B020004C17RikJ3QP07 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC15.69■□□□□ 0.1
B020004C17RikJ3QP07 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
B020004C17RikJ3QP07 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
B020004C17RikJ3QP07 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
B020004C17RikJ3QP07 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
B020004C17RikJ3QP07 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
B020004C17RikJ3QP07 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
B020004C17RikJ3QP07 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
B020004C17RikJ3QP07 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
B020004C17RikJ3QP07 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
B020004C17RikJ3QP07 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
B020004C17RikJ3QP07 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
B020004C17RikJ3QP07 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
B020004C17RikJ3QP07 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
B020004C17RikJ3QP07 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
B020004C17RikJ3QP07 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
B020004C17RikJ3QP07 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
B020004C17RikJ3QP07 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC15.69■□□□□ 0.1
B020004C17RikJ3QP07 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
B020004C17RikJ3QP07 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
B020004C17RikJ3QP07 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
B020004C17RikJ3QP07 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
B020004C17RikJ3QP07 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
B020004C17RikJ3QP07 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
B020004C17RikJ3QP07 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
B020004C17RikJ3QP07 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
B020004C17RikJ3QP07 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
B020004C17RikJ3QP07 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
B020004C17RikJ3QP07 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
B020004C17RikJ3QP07 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
B020004C17RikJ3QP07 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
B020004C17RikJ3QP07 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
B020004C17RikJ3QP07 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
B020004C17RikJ3QP07 Gm12846-201ENSMUST00000120431 1373 ntBASIC15.68■□□□□ 0.1
B020004C17RikJ3QP07 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC15.68■□□□□ 0.1
B020004C17RikJ3QP07 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
B020004C17RikJ3QP07 Gm29705-201ENSMUST00000212598 474 ntBASIC15.68■□□□□ 0.1
B020004C17RikJ3QP07 Gm19309-201ENSMUST00000218295 205 ntBASIC15.68■□□□□ 0.1
B020004C17RikJ3QP07 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
B020004C17RikJ3QP07 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms