Protein–RNA interactions for Protein: J3QM54

Gm3727, Predicted gene 3727, mousemouse

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3727J3QM54 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Gm3727J3QM54 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC12.03□□□□□ -0.48
Gm3727J3QM54 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
Gm3727J3QM54 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Gm3727J3QM54 Gm9924-202ENSMUST00000192760 2311 ntBASIC12.03□□□□□ -0.48
Gm3727J3QM54 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Gm3727J3QM54 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Gm3727J3QM54 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Gm3727J3QM54 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Gm3727J3QM54 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Gm3727J3QM54 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC12.03□□□□□ -0.48
Gm3727J3QM54 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Gm3727J3QM54 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC12.02□□□□□ -0.48
Gm3727J3QM54 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Gm3727J3QM54 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Gm3727J3QM54 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.48
Gm3727J3QM54 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC12.02□□□□□ -0.48
Gm3727J3QM54 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Gm3727J3QM54 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Gm3727J3QM54 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Gm3727J3QM54 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Gm3727J3QM54 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Gm3727J3QM54 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Gm3727J3QM54 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Gm3727J3QM54 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Gm3727J3QM54 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Gm3727J3QM54 Gm11185-201ENSMUST00000117732 1007 ntBASIC12.02□□□□□ -0.49
Gm3727J3QM54 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
Gm3727J3QM54 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Gm3727J3QM54 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Gm3727J3QM54 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Gm3727J3QM54 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Gm3727J3QM54 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Gm3727J3QM54 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Gm3727J3QM54 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Gm3727J3QM54 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Gm3727J3QM54 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC12.02□□□□□ -0.49
Gm3727J3QM54 Gm6159-201ENSMUST00000191249 1724 ntBASIC12.02□□□□□ -0.49
Gm3727J3QM54 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Gm3727J3QM54 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Gm3727J3QM54 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC12.02□□□□□ -0.49
Gm3727J3QM54 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Gm3727J3QM54 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Gm3727J3QM54 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Gm3727J3QM54 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Gm3727J3QM54 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC12.01□□□□□ -0.49
Gm3727J3QM54 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Gm3727J3QM54 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Gm3727J3QM54 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Gm3727J3QM54 Gm14752-201ENSMUST00000120719 2075 ntBASIC12.01□□□□□ -0.49
Gm3727J3QM54 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Gm3727J3QM54 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC12.01□□□□□ -0.49
Gm3727J3QM54 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Gm3727J3QM54 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Gm3727J3QM54 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Gm3727J3QM54 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Gm3727J3QM54 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Gm3727J3QM54 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Gm3727J3QM54 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Gm3727J3QM54 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Gm3727J3QM54 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Gm3727J3QM54 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC12.01□□□□□ -0.49
Gm3727J3QM54 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Gm3727J3QM54 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC12.01□□□□□ -0.49
Gm3727J3QM54 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Gm3727J3QM54 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Gm3727J3QM54 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC12.01□□□□□ -0.49
Gm3727J3QM54 Gm6296-201ENSMUST00000222599 943 ntBASIC12.01□□□□□ -0.49
Gm3727J3QM54 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Gm3727J3QM54 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Gm3727J3QM54 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Gm3727J3QM54 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC12.01□□□□□ -0.49
Gm3727J3QM54 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Gm3727J3QM54 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Gm3727J3QM54 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Gm3727J3QM54 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Gm3727J3QM54 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Gm3727J3QM54 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Gm3727J3QM54 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Gm3727J3QM54 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Gm3727J3QM54 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Gm3727J3QM54 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Gm3727J3QM54 Nudt18-203ENSMUST00000228768 1578 ntBASIC12.01□□□□□ -0.49
Gm3727J3QM54 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Gm3727J3QM54 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Gm3727J3QM54 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Gm3727J3QM54 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Gm3727J3QM54 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Gm3727J3QM54 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Gm3727J3QM54 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Gm3727J3QM54 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC12□□□□□ -0.49
Gm3727J3QM54 Gm37795-201ENSMUST00000194216 2459 ntBASIC12□□□□□ -0.49
Gm3727J3QM54 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Gm3727J3QM54 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Gm3727J3QM54 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC12□□□□□ -0.49
Gm3727J3QM54 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Gm3727J3QM54 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Gm3727J3QM54 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Gm3727J3QM54 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC12□□□□□ -0.49
Gm3727J3QM54 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms