Protein–RNA interactions for Protein: F6ZNL5

Pcdh11x, Protocadherin 11 X-linked, mousemouse

Predictions only

Length 1,338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh11xF6ZNL5 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdh11xF6ZNL5 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdh11xF6ZNL5 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdh11xF6ZNL5 Gm44291-201ENSMUST00000203102 2865 ntBASIC15.66■□□□□ 0.1
Pcdh11xF6ZNL5 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdh11xF6ZNL5 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdh11xF6ZNL5 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Pcdh11xF6ZNL5 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdh11xF6ZNL5 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdh11xF6ZNL5 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdh11xF6ZNL5 Ighv8-14-201ENSMUST00000196781 358 ntBASIC15.66■□□□□ 0.1
Pcdh11xF6ZNL5 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC15.66■□□□□ 0.1
Pcdh11xF6ZNL5 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC15.66■□□□□ 0.1
Pcdh11xF6ZNL5 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Pcdh11xF6ZNL5 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdh11xF6ZNL5 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdh11xF6ZNL5 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdh11xF6ZNL5 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdh11xF6ZNL5 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdh11xF6ZNL5 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdh11xF6ZNL5 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Pcdh11xF6ZNL5 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdh11xF6ZNL5 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
Pcdh11xF6ZNL5 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC15.65■□□□□ 0.1
Pcdh11xF6ZNL5 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
Pcdh11xF6ZNL5 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC15.65■□□□□ 0.1
Pcdh11xF6ZNL5 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdh11xF6ZNL5 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdh11xF6ZNL5 AC154767.3-201ENSMUST00000225150 1342 ntBASIC15.65■□□□□ 0.1
Pcdh11xF6ZNL5 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Pcdh11xF6ZNL5 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdh11xF6ZNL5 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdh11xF6ZNL5 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdh11xF6ZNL5 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
Pcdh11xF6ZNL5 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC15.65■□□□□ 0.1
Pcdh11xF6ZNL5 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdh11xF6ZNL5 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdh11xF6ZNL5 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdh11xF6ZNL5 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdh11xF6ZNL5 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdh11xF6ZNL5 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdh11xF6ZNL5 Dupd1-202ENSMUST00000224735 548 ntBASIC15.65■□□□□ 0.1
Pcdh11xF6ZNL5 AC126408.1-201ENSMUST00000225184 523 ntBASIC15.65■□□□□ 0.1
Pcdh11xF6ZNL5 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdh11xF6ZNL5 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdh11xF6ZNL5 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdh11xF6ZNL5 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdh11xF6ZNL5 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Pcdh11xF6ZNL5 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdh11xF6ZNL5 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdh11xF6ZNL5 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC15.64■□□□□ 0.09
Pcdh11xF6ZNL5 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Pcdh11xF6ZNL5 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdh11xF6ZNL5 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC15.64■□□□□ 0.09
Pcdh11xF6ZNL5 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdh11xF6ZNL5 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdh11xF6ZNL5 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdh11xF6ZNL5 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdh11xF6ZNL5 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC15.64■□□□□ 0.09
Pcdh11xF6ZNL5 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdh11xF6ZNL5 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdh11xF6ZNL5 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdh11xF6ZNL5 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdh11xF6ZNL5 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdh11xF6ZNL5 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdh11xF6ZNL5 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdh11xF6ZNL5 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
Pcdh11xF6ZNL5 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdh11xF6ZNL5 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC15.64■□□□□ 0.09
Pcdh11xF6ZNL5 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC15.64■□□□□ 0.09
Pcdh11xF6ZNL5 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
Pcdh11xF6ZNL5 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC15.64■□□□□ 0.09
Pcdh11xF6ZNL5 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC15.64■□□□□ 0.09
Pcdh11xF6ZNL5 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdh11xF6ZNL5 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Pcdh11xF6ZNL5 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdh11xF6ZNL5 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdh11xF6ZNL5 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdh11xF6ZNL5 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdh11xF6ZNL5 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdh11xF6ZNL5 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC15.63■□□□□ 0.09
Pcdh11xF6ZNL5 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdh11xF6ZNL5 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdh11xF6ZNL5 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdh11xF6ZNL5 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdh11xF6ZNL5 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdh11xF6ZNL5 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Pcdh11xF6ZNL5 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Pcdh11xF6ZNL5 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC15.63■□□□□ 0.09
Pcdh11xF6ZNL5 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdh11xF6ZNL5 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC15.63■□□□□ 0.09
Pcdh11xF6ZNL5 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Pcdh11xF6ZNL5 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC15.63■□□□□ 0.09
Pcdh11xF6ZNL5 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Pcdh11xF6ZNL5 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Pcdh11xF6ZNL5 Gm2445-201ENSMUST00000182798 989 ntBASIC15.63■□□□□ 0.09
Pcdh11xF6ZNL5 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdh11xF6ZNL5 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdh11xF6ZNL5 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdh11xF6ZNL5 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 54.3 ms